Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56106 |
Gene Name: | protocadherin gamma subfamily A, 10 |
Gene Aliases: |
PCDH-GAMMA-A10 |
Location: |
Chr.5:141413176-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA10 | NM_018913.2 | NP_061736.1 | ||
AF152319.1 | AAD43713.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
AB208927.1 | BAD92164.1 | |||
AF152323.1 | AAD43717.1 |
Target Gene Details
Entrez Gene ID: | 56111 |
Gene Name: | protocadherin gamma subfamily A, 4 |
Gene Aliases: |
PCDH-GAMMA-A4 |
Location: |
Chr.5:141355025-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA4 | NM_018917.3 | NP_061740.2 | ||
AF152324.1 | AAD43718.1 |
Target Gene Details
Entrez Gene ID: | 56110 |
Gene Name: | protocadherin gamma subfamily A, 5 |
Gene Aliases: |
CDH-GAMMA-A5, ME3, PCDH-GAMMA-A5 |
Location: |
Chr.5:141364331-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA5 | NM_018918.2 | NP_061741.1 | ||
AF152325.1 | AAD43719.1 |
Target Gene Details
Entrez Gene ID: | 56109 |
Gene Name: | protocadherin gamma subfamily A, 6 |
Gene Aliases: |
PCDH-GAMMA-A6 |
Location: |
Chr.5:141374084-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA6 | NM_018919.2 | NP_061742.1 | ||
AB209178.1 | BAD92415.1 | |||
AF152326.1 | AAD43720.1 | |||
BC146651.1 |
Target Gene Details
Entrez Gene ID: | 56108 |
Gene Name: | protocadherin gamma subfamily A, 7 |
Gene Aliases: |
PCDH-GAMMA-A7 |
Location: |
Chr.5:141382739-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA7 | NM_018920.3 | NP_061743.1 | ||
AB208958.1 | BAD92195.1 | |||
AF152327.1 | AAD43721.1 |
Target Gene Details
Entrez Gene ID: | 9708 |
Gene Name: | protocadherin gamma subfamily A, 8 |
Gene Aliases: |
PCDH-GAMMA-A8 |
Location: |
Chr.5:141391916-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA8 | NM_032088.1 | NP_114477.1 | ||
AF152328.1 | AAD43722.1 |
Target Gene Details
Entrez Gene ID: | 56107 |
Gene Name: | protocadherin gamma subfamily A, 9 |
Gene Aliases: |
PCDH-GAMMA-A9 |
Location: |
Chr.5:141402953-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA9 | NM_018921.2 | NP_061744.1 | ||
AF152329.1 | AAD43723.1 |
Target Gene Details
Entrez Gene ID: | 56104 |
Gene Name: | protocadherin gamma subfamily B, 1 |
Gene Aliases: |
PCDH-GAMMA-B1 |
Location: |
Chr.5:141350261-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB1 | NM_018922.2 | NP_061745.1 | ||
AF152330.1 | AAD43724.1 |
Target Gene Details
Entrez Gene ID: | 56103 |
Gene Name: | protocadherin gamma subfamily B, 2 |
Gene Aliases: |
PCDH-GAMMA-B2 |
Location: |
Chr.5:141360136-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB2 | NM_018923.2 | NP_061746.1 | ||
AF152331.1 | AAD43725.1 |
Target Gene Details
Entrez Gene ID: | 56102 |
Gene Name: | protocadherin gamma subfamily B, 3 |
Gene Aliases: |
PCDH-GAMMA-B3 |
Location: |
Chr.5:141370264-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB3 | NM_018924.4 | NP_061747.2 | ||
AF152332.1 | AAD43726.1 | |||
BC150172.1 |
Target Gene Details
Entrez Gene ID: | 8641 |
Gene Name: | protocadherin gamma subfamily B, 4 |
Gene Aliases: |
CDH20, FIB2, PCDH-GAMMA-B4 |
Location: |
Chr.5:141387885-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB4 | NM_003736.2 | NP_003727.1 | ||
AF152333.1 | AAD43727.1 |
Target Gene Details
Entrez Gene ID: | 56101 |
Gene Name: | protocadherin gamma subfamily B, 5 |
Gene Aliases: |
PCDH-GAMMA-B5 |
Location: |
Chr.5:141398128-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB5 | NM_018925.2 | NP_061748.1 | ||
AF152334.1 | AAD43728.1 |
Target Gene Details
Entrez Gene ID: | 56100 |
Gene Name: | protocadherin gamma subfamily B, 6 |
Gene Aliases: |
PCDH-GAMMA-B6 |
Location: |
Chr.5:141408203-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB6 | NM_018926.2 | NP_061749.1 | ||
AF152335.1 | AAD43729.1 |
Target Gene Details
Entrez Gene ID: | 56099 |
Gene Name: | protocadherin gamma subfamily B, 7 |
Gene Aliases: |
ME6, PCDH-GAMMA-B7 |
Location: |
Chr.5:141417647-141512981 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB7 | NM_018927.3 | 1 | 700 | NP_061750.1 |
NM_032101.2 | 1 | 746 | NP_115272.1 | |
AF152336.1 | 1 | 533 | AAD43730.1 | |
AF152523.1 | 1 | 533 | AAD43783.1 | |
BC051788.2 | 1 | 727 | AAH51788.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | PCDHGA4 PCDHAC2 PCDHGA5 PCDHGB4 PCDHGA2 PCDHGB7 PCDHB14 PCDHB5 PCDHA6 PCDHB7 PCDHA8 PCDHGB1 PCDHGA6 PCDHA7 PCDHA10 PCDHB15 PCDHGB6 PCDHGA9 PCDHA9 PCDHA1 TAF7 PCDHB6 PCDHB17P PCDHB12 PCDHGA12 PCDHGB2 PCDHGA8 SLC25A2 PCDHA2 LOC101926905 PCDHGA7 PCDHGA11 PCDHA12 PCDHB19P PCDHA13 PCDHA4 PCDHB18P PCDHGB5 PCDHB1 PCDHB8 PCDHGA3 PCDHB13 PCDHAC1 PCDHGB3 PCDHGA10 PCDHB10 PCDHA3 PCDHB11 PCDHA5 PCDHB3 PCDHGB8P PCDHB16 PCDHA11 PCDHB9 PCDHB2 PCDHGA1 PCDHB4 |
esv3606987 | Chr.5:141415048 - 141430227 on Build GRCh38 | Gain | PCDHGA4 PCDHGA5 PCDHGB3 PCDHGB4 PCDHGA10 PCDHGA2 PCDHGB7 PCDHGB2 PCDHGA8 PCDHGB1 PCDHGB8P PCDHGA6 PCDHGB5 PCDHGA7 PCDHGA11 PCDHGA1 PCDHGA3 PCDHGB6 PCDHGA9 |
nsv519627 | Chr.5:141392860 - 141427689 on Build GRCh38 | Loss | PCDHGA4 PCDHGA5 PCDHGB3 PCDHGB4 PCDHGA10 PCDHGA2 PCDHGB7 PCDHGB2 PCDHGA8 PCDHGB1 PCDHGB8P PCDHGA6 PCDHGB5 PCDHGA7 PCDHGA11 PCDHGA1 PCDHGA3 PCDHGB6 PCDHGA9 |
esv2730847 | Chr.5:141415403 - 141432967 on Build GRCh38 | Deletion | PCDHGA4 PCDHGA5 PCDHGB3 PCDHGB4 PCDHGA10 PCDHGA2 PCDHGB7 PCDHGA12 PCDHGB2 PCDHGA8 PCDHGB1 PCDHGB8P PCDHGA6 PCDHGB5 PCDHGA7 PCDHGA11 PCDHGA1 PCDHGA3 PCDHGB6 PCDHGA9 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |