Assay Details
Target Gene Details
Entrez Gene ID: | 57657 |
Gene Name: | hyperpolarization activated cyclic nucleotide gated potassium channel 3 |
Gene Aliases: |
- |
Location: |
Chr.1:155277427-155289848 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 4 - Intron 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HCN3 | NM_020897.2 | NP_065948.1 | ||
NR_073074.1 | ||||
XM_011509816.2 | XP_011508118.1 | |||
XM_011509817.2 | XP_011508119.1 | |||
XM_011509818.2 | XP_011508120.1 | |||
XM_017001918.1 | XP_016857407.1 | |||
AB040968.2 | BAA96059.2 | |||
AF488550.1 | AAO49470.1 | |||
AK055840.1 | 3 | 730 | ||
AK299333.1 | ||||
BC000066.1 | AAH00066.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv831636 | Chr.1:155249432 - 155475073 on Build GRCh38 | Loss | RUSC1-AS1 SCAMP3 MIR555 RUSC1 PKLR ASH1L POU5F1P4 HCN3 FAM189B CLK2 LOC105371451 FDPS |
esv33869 | Chr.1:155253492 - 155948170 on Build GRCh38 | Loss | MSTO2P SCAMP3 PKLR SNORA80E GON4L SYT11 RIT1 SCARNA4 FAM189B RXFP4 ASH1L-AS1 KIAA0907 FDPS RUSC1-AS1 DAP3 RUSC1 SCARNA26B MSTO1 CLK2 LOC105371451 SCARNA26A MIR555 YY1AP1 ASH1L POU5F1P4 HCN3 ARHGEF2 LOC100505728 |
nsv952214 | Chr.1:155279610 - 155304509 on Build GRCh38 | Deletion | PKLR HCN3 |
nsv436027 | Chr.1:155260761 - 155291532 on Build GRCh38 | Insertion | SCAMP3 PKLR HCN3 CLK2 |
esv23319 | Chr.1:155257268 - 155292883 on Build GRCh38 | Gain | SCAMP3 PKLR HCN3 CLK2 |
dgv3n68 | Chr.1:155122502 - 155343618 on Build GRCh38 | Loss | RUSC1-AS1 SCAMP3 RUSC1 PKLR DPM3 EFNA1 CLK2 LOC105371451 TRIM46 GBAP1 GBA MIR92B MUC1 ASH1L HCN3 SLC50A1 FAM189B KRTCAP2 THBS3 MTX1 FDPS |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |