Assay Details
Target Gene Details
Entrez Gene ID: | 10519 |
Gene Name: | calcium and integrin binding 1 |
Gene Aliases: |
CIB, CIBP, KIP1, PRKDCIP, SIP2-28 |
Location: |
Chr.15:90230245-90265759 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CIB1 | NR_102428.1 | |||
BG759961.1 |
Target Gene Details
Entrez Gene ID: | 390637 |
Gene Name: | GDP-D-glucose phosphorylase 1 |
Gene Aliases: |
C15orf58, VTC2 |
Location: |
Chr.15:90234255-90242080 on Build GRCh38 |
Assay Gene Location: | Within Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GDPGP1 | NM_001013657.2 | 4 | 923 | NP_001013679.2 |
NM_001322811.1 | 5 | 1042 | NP_001309740.1 | |
AK130527.1 | 4 | 1509 | BAC85370.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv833087 | Chr.15:90208675 - 90425725 on Build GRCh38 | Loss | GABARAPL3 TTLL13P LOC400446 IQGAP1 NGRN GDPGP1 CIB1 SEMA4B ZNF774 |
nsv1052652 | Chr.15:90101186 - 90298961 on Build GRCh38 | Gain | TTLL13P LOC400446 NGRN GDPGP1 IDH2 CIB1 SEMA4B |
dgv112e55 | Chr.15:90079272 - 90249274 on Build GRCh38 | Gain | GDPGP1 IDH2 CIB1 SEMA4B ZNF710 |
esv2760054 | Chr.15:90022724 - 90266401 on Build GRCh38 | Gain | TTLL13P NGRN GDPGP1 IDH2 CIB1 SEMA4B ZNF710 |
nsv817707 | Chr.15:90104624 - 90241698 on Build GRCh38 | Gain | GDPGP1 CIB1 SEMA4B |
More Information
Additional Information:
For this assay, SNP(s) [rs75296384] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |