Assay Details
Target Gene Details
Entrez Gene ID: | 6560 |
Gene Name: | solute carrier family 12 member 4 |
Gene Aliases: |
CTC-479C5.17, KCC1, hKCC1 |
Location: |
Chr.16:67943474-67968694 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 13 - Exon 14 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC12A4 | NM_001145961.1 | NP_001139433.1 | ||
NM_001145962.1 | NP_001139434.1 | |||
NM_001145963.1 | NP_001139435.1 | |||
NM_001145964.1 | NP_001139436.1 | |||
NM_005072.4 | NP_005063.1 | |||
AF047338.1 | AAC32815.1 | |||
AF053402.1 | AAC35282.1 | |||
AF054505.1 | AAC39684.1 | |||
AF054506.1 | AAC39685.1 | |||
AK026911.1 | ||||
AK097808.1 | ||||
AK293906.1 | ||||
AK293956.1 | ||||
AK299042.1 | ||||
AK302790.1 | ||||
AK316415.1 | ||||
BC021193.2 | AAH21193.1 | |||
U55054.1 | AAC50563.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv522852 | Chr.16:67153308 - 68071571 on Build GRCh38 | Gain | DDX28 PLEKHG4 CTRL C16orf86 CENPT ELMO3 ACD TRADD ENKD1 EDC4 LCAT LOC100131303 ATP6V0D1 HSF4 E2F4 TSNAXIP1 RANBP10 NOL3 KIAA0895L MIR328 FAM65A FBXL8 CARMIL2 DPEP2 PSKH1 SLC12A4 EXOC3L1 TMEM208 PSMB10 LRRC36 NUTF2 GFOD2 THAP11 CTCF FHOD1 LRRC29 ZDHHC1 SLC9A5 LOC105369155 DPEP3 DUS2 NRN1L PARD6A LOC107984813 LOC100505942 TPPP3 KCTD19 HSD11B2 AGRP |
nsv524363 | Chr.16:67136529 - 68071571 on Build GRCh38 | Loss | DDX28 PLEKHG4 CTRL C16orf86 CENPT ELMO3 ACD TRADD ENKD1 EDC4 LCAT LOC100131303 ATP6V0D1 HSF4 E2F4 TSNAXIP1 RANBP10 NOL3 KIAA0895L MIR328 FAM65A FBXL8 CARMIL2 DPEP2 PSKH1 SLC12A4 EXOC3L1 TMEM208 PSMB10 LRRC36 NUTF2 GFOD2 THAP11 CTCF FHOD1 LRRC29 ZDHHC1 B3GNT9 SLC9A5 LOC105369155 DPEP3 DUS2 NRN1L C16orf70 PARD6A LOC107984813 LOC100505942 TPPP3 KCTD19 HSD11B2 AGRP |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |