Assay Details
Target Gene Details
Entrez Gene ID: | 51540 |
Gene Name: | selenocysteine lyase |
Gene Aliases: |
SCL, hSCL |
Location: |
Chr.2:238060924-238099413 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 4 - Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SCLY | NM_016510.5 | NP_057594.4 | ||
AB209458.2 | BAD92695.1 | |||
AF175767.1 | AAF36816.1 | |||
AK127520.1 | 1 | 3171 | ||
AK293283.1 | ||||
AK298409.1 | ||||
AK301009.1 | ||||
BC000586.2 | AAH00586.2 | |||
BC007891.2 | AAH07891.1 | |||
DN995828.1 |
Target Gene Details
Entrez Gene ID: | 100533179 |
Gene Name: | UBE2F-SCLY readthrough (NMD candidate) |
Gene Aliases: |
- |
Location: |
Chr.2:237966945-238099413 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 11 - Exon 12 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
UBE2F-SCLY | NR_037904.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv508894 | Chr.2:238076839 - 238177028 on Build GRCh38 | Insertion | UBE2F-SCLY ESPNL SCLY KLHL30 ERFE ILKAP |
nsv1000252 | Chr.2:235899999 - 238766417 on Build GRCh38 | Loss | COPS8 TRAF3IP1 AGAP1 GBX2 PRLH COL6A3 IQCA1 LRRFIP1 SCLY MIR6811 LOC151174 LOC105373944 UBE2F ESPNL LOC105373958 KLHL30 RAMP1 ACKR3 RBM44 LOC105373991 HES6 LINC01107 LOC93463 LOC101927958 PER2 UBE2F-SCLY MLPH ERFE ILKAP ASB1 ASB18 RAB17 LOC643387 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |