Assay Details
Target Gene Details
Entrez Gene ID: | 8888 |
Gene Name: | minichromosome maintenance complex component 3 associated protein |
Gene Aliases: |
GANP, MAP80, SAC3 |
Location: |
Chr.21:46235125-46286274 on Build GRCh38 |
Assay Gene Location: | Within Exon 21 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MCM3AP | NM_003906.4 | 20 | 4332 | NP_003897.2 |
XM_005261203.4 | 21 | 4908 | XP_005261260.1 | |
XM_005261204.4 | 21 | 4804 | XP_005261261.1 | |
XM_005261205.3 | 21 | 4420 | XP_005261262.1 | |
AB005543.1 | 5 | 817 | BAA25170.1 | |
AB011144.1 | 20 | 3902 | BAA25498.1 | |
AJ010089.1 | 20 | 4261 | CAB52687.1 | |
AK126313.1 | 11 | 2514 | ||
AK127239.1 | 10 | 2221 | ||
AK304208.1 | 20 | 3191 | ||
BC004497.2 | AAH04497.2 | |||
BC013285.2 | 5 | 618 | AAH13285.2 | |
BC104958.1 | 20 | 4300 | AAI04959.1 | |
BC104960.1 | 20 | 4300 | AAI04961.1 |
Target Gene Details
Entrez Gene ID: | 114044 |
Gene Name: | MCM3AP antisense RNA 1 |
Gene Aliases: |
C21orf85, MCM3AP-AS, MCM3APAS, MCM3APASB, NCRNA00031 |
Location: |
Chr.21:46229231-46251701 on Build GRCh38 |
Assay Gene Location: | Within Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MCM3AP-AS1 | NR_002776.4 | 3 | 2232 | |
NR_110565.1 | 4 | 2433 | ||
AF426263.1 | 4 | 2434 | ||
AK001370.1 | 4 | 2434 | ||
AK054878.1 | 1 | 2619 | ||
BC059792.1 | 3 | 2223 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv519904 | Chr.21:46163592 - 46461396 on Build GRCh38 | Loss | PCNT C21orf58 MCM3AP SPATC1L MCM3AP-AS1 YBEY DIP2A LSS |
nsv470910 | Chr.21:45933861 - 46665076 on Build GRCh38 | Gain | DIP2A-IT1 LOC101928796 C21orf58 PRMT2 SPATC1L MCM3AP-AS1 S100B COL6A2 PCNT MCM3AP YBEY DIP2A LSS FTCD COL6A1 PCBP3 |
nsv587975 | Chr.21:46241321 - 46410929 on Build GRCh38 | Gain | PCNT C21orf58 MCM3AP MCM3AP-AS1 YBEY |
nsv1060978 | Chr.21:46068159 - 46413726 on Build GRCh38 | Gain | PCNT C21orf58 MCM3AP SPATC1L MCM3AP-AS1 YBEY LSS FTCD COL6A2 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |