Assay Details
Target Gene Details
Entrez Gene ID: | 8681 |
Gene Name: | JMJD7-PLA2G4B readthrough |
Gene Aliases: |
HsT16992, cPLA2-beta |
Location: |
Chr.15:41828085-41848148 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 16 - Exon 17 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
JMJD7-PLA2G4B | NM_001198588.1 | NP_001185517.1 | ||
NM_005090.3 | NP_005081.1 | |||
AB209150.1 | BAD92387.1 | |||
AF065215.1 | AAC78836.1 | |||
AF065216.1 | ||||
AF121908.1 | AAD32135.1 | |||
DA080158.1 | ||||
DQ523799.1 | ||||
DQ523800.1 |
Target Gene Details
Entrez Gene ID: | 100137049 |
Gene Name: | phospholipase A2 group IVB |
Gene Aliases: |
HsT16992, cPLA2-beta |
Location: |
Chr.15:41838813-41848148 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 11 - Exon 12 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PLA2G4B | NM_001114633.1 | NP_001108105.1 | ||
AK124489.1 | ||||
AK299419.1 | ||||
AK310651.1 | ||||
BX648318.1 | 1 | 2002 | ||
CA488226.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv9244 | Chr.15:41818514 - 41916607 on Build GRCh38 | Gain | SPTBN5 JMJD7 EHD4 LOC105370792 PLA2G4B JMJD7-PLA2G4B MAPKBP1 MIR4310 |
nsv1035998 | Chr.15:41806698 - 42142056 on Build GRCh38 | Gain | PLA2G4E SPTBN5 EHD4 JMJD7-PLA2G4B MAPKBP1 PLA2G4F MIR4310 PLA2G4D JMJD7 LOC105370792 PLA2G4B PLA2G4E-AS1 EHD4-AS1 |
nsv1050892 | Chr.15:41836657 - 41894284 on Build GRCh38 | Gain | SPTBN5 JMJD7 LOC105370792 PLA2G4B JMJD7-PLA2G4B MIR4310 |
nsv1506 | Chr.15:41824733 - 41857173 on Build GRCh38 | Insertion | SPTBN5 JMJD7 PLA2G4B JMJD7-PLA2G4B MAPKBP1 |
nsv952613 | Chr.15:41816803 - 41884902 on Build GRCh38 | Deletion | SPTBN5 JMJD7 PLA2G4B JMJD7-PLA2G4B MAPKBP1 MIR4310 |
nsv517631 | Chr.15:41804728 - 41895294 on Build GRCh38 | Loss | SPTBN5 JMJD7 LOC105370792 PLA2G4B JMJD7-PLA2G4B MAPKBP1 MIR4310 |
dgv2582n100 | Chr.15:41791376 - 41900562 on Build GRCh38 | Gain | SPTBN5 JMJD7 EHD4 LOC105370792 PLA2G4B JMJD7-PLA2G4B MAPKBP1 MIR4310 |
More Information
Additional Information:
For this assay, SNP(s) [rs145236773] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Non-exonic DGV Variation |