Assay Details
Target Gene Details
Entrez Gene ID: | 57657 |
Gene Name: | hyperpolarization activated cyclic nucleotide gated potassium channel 3 |
Gene Aliases: |
- |
Location: |
Chr.1:155277427-155289848 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HCN3 | NM_020897.2 | 1 | 320 | NP_065948.1 |
NR_073074.1 | 1 | 320 | ||
XM_011509817.2 | 1 | 320 | XP_011508119.1 | |
AB040968.2 | BAA96059.2 | |||
AF488550.1 | 1 | 164 | AAO49470.1 | |
AK055840.1 | ||||
AK299333.1 | 1 | 293 | ||
BC111364.1 | 1 | 274 | AAI11365.1 | |
DA127524.1 | 1 | 320 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv831636 | Chr.1:155249432 - 155475073 on Build GRCh38 | Loss | RUSC1-AS1 CLK2 HCN3 LOC105371451 MIR555 FDPS SCAMP3 PKLR RUSC1 POU5F1P4 ASH1L FAM189B |
esv33869 | Chr.1:155253492 - 155948170 on Build GRCh38 | Loss | LOC100505728 ASH1L-AS1 GON4L SNORA80E SYT11 ASH1L KIAA0907 CLK2 RIT1 HCN3 YY1AP1 SCAMP3 RUSC1 RXFP4 RUSC1-AS1 MIR555 DAP3 SCARNA26B ARHGEF2 POU5F1P4 FAM189B MSTO2P SCARNA4 LOC105371451 FDPS MSTO1 PKLR SCARNA26A |
nsv3021 | Chr.1:155275103 - 155278531 on Build GRCh38 | Insertion | HCN3 |
nsv436027 | Chr.1:155260761 - 155291532 on Build GRCh38 | Insertion | CLK2 HCN3 SCAMP3 PKLR |
esv23319 | Chr.1:155257268 - 155292883 on Build GRCh38 | Gain | CLK2 HCN3 SCAMP3 PKLR |
dgv3n68 | Chr.1:155122502 - 155343618 on Build GRCh38 | Loss | RUSC1-AS1 KRTCAP2 EFNA1 GBA SLC50A1 MTX1 TRIM46 DPM3 ASH1L FAM189B CLK2 HCN3 MUC1 LOC105371451 MIR92B THBS3 FDPS SCAMP3 PKLR RUSC1 GBAP1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |