Assay Details
Target Gene Details
Entrez Gene ID: | 78991 |
Gene Name: | prenylcysteine oxidase 1 like |
Gene Aliases: |
- |
Location: |
Chr.5:149358007-149375112 on Build GRCh38 |
Assay Gene Location: | Within Exon 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCYOX1L | NM_001301054.1 | 6 | 2459 | NP_001287983.1 |
NM_001301057.1 | 6 | 2282 | NP_001287986.1 | |
NM_024028.3 | 6 | 2443 | NP_076933.3 | |
XM_011537680.1 | 7 | 2463 | XP_011535982.1 | |
XM_011537681.1 | 5 | 2253 | XP_011535983.1 | |
XM_011537682.2 | 3 | 1789 | XP_011535984.1 | |
AF451985.1 | 6 | 2404 | AAP97684.1 | |
AK075414.1 | 6 | 2404 | BAC11604.1 | |
AK090410.1 | 3 | 4784 | BAC03391.1 | |
AK127281.1 | 4 | 4069 | ||
AL834220.1 | 5 | 2702 | CAD38901.2 | |
BC000014.2 | 6 | 2218 | AAH00014.1 | |
BC004166.2 | 3 | 1865 | AAH04166.3 | |
BP397957.1 | 1 | 397 | ||
DB573610.1 | 1 | 341 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv599948 | Chr.5:149346599 - 149413198 on Build GRCh38 | Loss | PCYOX1L GRPEL2-AS1 GRPEL2 CARMN IL17B |
More Information
Additional Information:
For this assay, SNP(s) [rs77600325] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |