Assay Details
Target Gene Details
Entrez Gene ID: | 284340 |
Gene Name: | C-X-C motif chemokine ligand 17 |
Gene Aliases: |
DMC, Dcip1, UNQ473, VCC-1, VCC1 |
Location: |
Chr.19:42428538-42443048 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CXCL17 | NM_198477.2 | 4 | 525 | NP_940879.1 |
NR_133910.1 | 4 | 542 | ||
AK292985.1 | 4 | 423 | ||
AY358433.1 | 4 | 461 | AAQ88799.1 | |
AY598464.1 | 4 | 525 | AAU04875.1 | |
BC093946.1 | 4 | 376 | AAH93946.1 | |
BC112095.1 | 4 | 378 | AAI12096.1 | |
BM978124.1 | 1 | 410 | ||
BU684368.1 | 1 | 414 |
Target Gene Details
Entrez Gene ID: | 100996307 |
Gene Name: | LIPE antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.19:42397148-42652355 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LIPE-AS1 | NR_073179.1 | |||
NR_073180.1 | ||||
AK096849.1 | BAC04875.1 | |||
AK310497.1 | ||||
AK311181.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv526186 | Chr.19:42172329 - 42699355 on Build GRCh38 | Gain | MEGF8 LOC101930071 ZNF526 PRR19 MIR8077 CNFN ERF POU2F2 DEDD2 TMEM145 LIPE CEACAM8 LIPE-AS1 PAFAH1B3 CEACAM1 GSK3A CIC CXCL17 |
esv2422471 | Chr.19:42228989 - 43165333 on Build GRCh38 | Deletion | MEGF8 LOC101930071 PSG10P PRR19 PSG3 LOC100289650 PSG1 PSG8 MIR8077 PSG2 CNFN ERF TMEM145 PSG6 LIPE PSG7 CEACAM8 LIPE-AS1 PSG11 PAFAH1B3 CEACAM1 GSK3A CIC CXCL17 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |