Assay Details
Target Gene Details
Entrez Gene ID: | 823 |
Gene Name: | calpain 1 |
Gene Aliases: |
CANP, CANP1, CANPL1, SPG76, muCANP, muCL |
Location: |
Chr.11:65181215-65212006 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 3 - Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CAPN1 | NM_001198868.1 | NP_001185797.1 | ||
NM_001198869.1 | NP_001185798.1 | |||
NM_005186.3 | NP_005177.2 | |||
NR_040008.1 | ||||
XM_006718698.1 | XP_006718761.1 | |||
XM_011545292.1 | XP_011543594.1 | |||
AK301538.1 | ||||
AK311001.1 | ||||
AK315556.1 | ||||
AY550975.1 | AAT52221.1 | |||
BC008751.2 | AAH08751.1 | |||
BC017200.2 | AAH17200.1 | |||
BC075862.1 | AAH75862.1 | |||
BE018156.1 | ||||
DA788342.1 | ||||
DC365116.1 | ||||
DC372552.1 | ||||
X04366.1 | CAA27881.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509418 | Chr.11:65164531 - 65202781 on Build GRCh38 | Insertion | CAPN1 SPDYC |
nsv526181 | Chr.11:64870569 - 65489858 on Build GRCh38 | Gain | MIR194-2HG GPHA2 MIR6879 POLA2 BATF2 TIGD3 SAC3D1 EHD1 TMEM262 FRMD8 NAALADL1 CDCA5 NEAT1 CDC42EP2 PPP2R5B MIR194-2 LOC101927789 ZNHIT2 TM7SF2 ARL2 ZFPL1 SLC22A20 MRPL49 MAJIN ARL2-SNX15 MIR6749 SNX15 SLC25A45 DPF2 MIR6751 MIR612 MIR192 MIR6750 CAPN1 FAU SPDYC SYVN1 VPS51 ATG2A |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |