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Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:973200 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01343194_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 10 - Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 NM_001160184.1 NP_001153656.1
NM_032129.2 NP_115505.2
XM_006710944.3 XP_006711007.2
XM_011542248.2 XP_011540550.2
XM_017002474.1 XP_016857963.1
XM_017002475.1 XP_016857964.1
XM_017002476.1 XP_016857965.1
XM_017002477.1 XP_016857966.1
XM_017002478.1 XP_016857967.1
AL136730.1 CAB66664.1
BC101386.2 AAI01387.1
BC101387.2 AAI01388.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain AGRN ISG15 HES4 LOC107985728 LOC105378948 RNF223 SAMD11 PERM1 NOC2L PLEKHN1 KLHL17 LOC100288175 C1orf159 LOC284600 LOC100130417
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MTND1P23 MIR6859-1 LOC100129534 ATAD3C LOC102725121 B3GALT6 HES4 NOC2L FAM41C FNDC10 DDX11L1 MIR6859-2 LOC100288175 MIR200B MIR6726 LOC100288069 CPTP SDF4 LOC107985729 LOC101928626 GNB1 CDK11A LOC100133331 WASH7P LINC01342 GABRD LOC105378592 LOC102724312 LINC00115 OR4F5 CCNL2 OR4F16 MRPL20 TMEM88B LOC100506504 ANKRD65 ATAD3A TNFRSF4 SSU72 CDK11B MIB2 LOC100130417 TTLL10-AS1 LOC107984841 NADK FAAP20 SAMD11 KLHL17 SKI LOC729737 MIR6723 MMP23B DVL1 TMEM52 CALML6 TTLL10 LOC105378948 RNF223 AURKAIP1 PLEKHN1 LOC148413 LINC01128 LOC105378591 TNFRSF18 PRKCZ SCNN1D LOC107985728 LOC100132287 UBE2J2 SLC35E2 MIR6727 MIR6808 FAM138A LOC284600 LOC105378589 AGRN ISG15 VWA1 LOC105378947 PUSL1 ACAP3 TMEM240 TAS1R3 MIR200A FAM132A LOC105378949 C1orf159 MTND2P28 CFAP74 SLC35E2B FAM87B LOC100134822 ATAD3B MXRA8 CPSF3L MMP23A PERM1 LOC100287934 OR4F29 MIR1302-2 MORN1 MIR429
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion AGRN ISG15 HES4 LOC107985728 LOC105378948 RNF223 SAMD11 PERM1 NOC2L PLEKHN1 KLHL17 LOC100288175 C1orf159 LOC284600 LOC100130417
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion LOC107985728 LOC284600 SAMD11 PERM1 LOC100130417 NOC2L PLEKHN1 KLHL17
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain AGRN ISG15 HES4 TTLL10 LOC105378948 RNF223 NOC2L PLEKHN1 FAM41C MIR200A TNFRSF4 LOC100288175 MIR200B C1orf159 TNFRSF18 LOC100130417 TTLL10-AS1 SDF4 LOC107985728 SAMD11 PERM1 KLHL17 LINC01342 LOC284600 MIR429
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain AGRN MTND1P23 ISG15 HES4 LOC105378947 LOC105378948 RNF223 NOC2L PLEKHN1 FAM41C LINC01128 LOC100288175 C1orf159 LOC100130417 MTND2P28 LOC100288069 LOC107984841 FAM87B LOC101928626 LOC107985728 LOC100133331 SAMD11 PERM1 KLHL17 LOC100287934 MIR6723 LOC284600 LINC00115 OR4F16
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss ATAD3C B3GALT6 HES4 TTLL10 LOC105378948 RNF223 AURKAIP1 NOC2L PLEKHN1 FAM41C FNDC10 LOC148413 LINC01128 LOC100288175 MIR200B TNFRSF18 MIR6726 LOC100288069 CPTP SDF4 LOC107985729 SCNN1D LOC107985728 CDK11A UBE2J2 SLC35E2 MIR6727 LINC01342 MIR6808 LOC284600 LOC102724312 LINC00115 CCNL2 AGRN ISG15 MRPL20 VWA1 PUSL1 TMEM88B ACAP3 ANKRD65 TMEM240 ATAD3A TAS1R3 MIR200A FAM132A TNFRSF4 SSU72 C1orf159 CDK11B MIB2 LOC100130417 TTLL10-AS1 SLC35E2B FAM87B ATAD3B NADK MXRA8 CPSF3L MMP23A SAMD11 PERM1 KLHL17 LOC100287934 MMP23B DVL1 MIR429
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss AGRN ISG15 B3GALT6 HES4 TTLL10 LOC105378948 RNF223 NOC2L PLEKHN1 FAM41C MIR200A FAM132A TNFRSF4 LINC01128 LOC100288175 MIR200B C1orf159 TNFRSF18 LOC100130417 TTLL10-AS1 SDF4 FAM87B LOC107985728 UBE2J2 SAMD11 PERM1 KLHL17 LINC01342 LOC284600 LINC00115 MIR429
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain AGRN ISG15 HES4 LOC105378948 RNF223 SAMD11 PERM1 NOC2L PLEKHN1 KLHL17 LINC01342 LOC100288175 C1orf159
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion SDF4 AGRN ISG15 HES4 TTLL10 LOC105378948 RNF223 SAMD11 PERM1 NOC2L PLEKHN1 KLHL17 LINC01342 MIR200A TNFRSF4 LOC100288175 MIR200B C1orf159 TNFRSF18 TTLL10-AS1 MIR429
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss AGRN ISG15 HES4 LOC107985728 LOC284600 SAMD11 PERM1 LOC100130417 NOC2L PLEKHN1 KLHL17
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain AGRN ISG15 MRPL20 B3GALT6 HES4 PUSL1 TTLL10 LOC105378948 RNF223 AURKAIP1 TMEM88B ACAP3 NOC2L PLEKHN1 ANKRD65 TAS1R3 MIR200A LOC148413 FAM132A TNFRSF4 LOC100288175 MIR200B C1orf159 TNFRSF18 LOC100130417 MIR6726 TTLL10-AS1 CPTP SDF4 SCNN1D MXRA8 LOC107985728 CPSF3L UBE2J2 SAMD11 PERM1 KLHL17 MIR6727 LINC01342 MIR6808 DVL1 LOC284600 MIR429 CCNL2
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain LINC01128 HES4 LOC107985728 LOC284600 SAMD11 PERM1 LOC100130417 NOC2L PLEKHN1 KLHL17 FAM41C

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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