Assay Details
Target Gene Details
Entrez Gene ID: | 57333 |
Gene Name: | reticulocalbin 3 |
Gene Aliases: |
RLP49 |
Location: |
Chr.19:49527579-49543638 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RCN3 | NM_020650.2 | NP_065701.2 | ||
XM_005259089.3 | XP_005259146.1 | |||
XM_011527143.1 | XP_011525445.1 | |||
XM_017027023.1 | 2 | 735 | XP_016882512.1 | |
AF183423.1 | AAG09692.1 | |||
AY195859.1 | AAO43054.1 | |||
AY358423.1 | AAQ88789.1 | |||
BC013436.1 | AAH13436.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss | PTOV1 MIR4324 RPS11 ADM5 KDELR1 SLC17A7 MIR6800 CGB7 RASIP1 ATF5 SPHK2 NOSIP SNAR-G1 SNORD35A PPFIA3 CGB3 SNAR-A3 MIR5088 TEAD2 TMEM143 PIH1D1 LOC100287477 PLA2G4C SULT2B1 CD37 TULP2 SNAR-A4 SNAR-C4 SNAR-A10 SNORD34 AKT1S1 FUT1 FGF21 FLJ26850 FAM83E LHB SNAR-C5 SEC1P NUCB1-AS1 PTH2 CARD8-AS1 FLT3LG SNAR-G2 SNAR-A1 TSKS MIR4751 LIN7B SNAR-A9 AP2A1 PTOV1-AS1 CGB5 SNAR-B1 GRIN2D SNAR-A12 VRK3 ZNF114 BCL2L12 TBC1D17 SNAR-C3 SNAR-A8 CPT1C PLA2G4C-AS1 LOC105372430 ELSPBP1 FUZ CGB8 CA11 MAMSTR SIGLEC16 RUVBL2 SLC6A16 DKKL1 SNAR-A7 SNRNP70 LOC105447645 RPL13A FCGRT MIR6799 SCAF1 HRC C19orf73 NUP62 SNAR-A11 PNKP PRRG2 RCN3 IRF3 SNAR-D CGB2 LOC101928295 CGB1 BAX SNAR-A13 SNAR-A5 TRPM4 FUT2 RPL18 IL4I1 CARD8 FTL CCDC114 DHDH KCNJ14 BCAT2 KCNA7 PTOV1-AS2 SNAR-C1 CYTH2 IZUMO1 DBP MED25 PLEKHA4 MIR4750 NUCB1 MIR6798 MIR150 EMP3 SNAR-C2 LIG1 SNAR-A14 GFY SYNGR4 LMTK3 ALDH16A1 SNAR-A2 CABP5 HSD17B14 C19orf68 PPP1R15A ZNF473 NTF4 CCDC155 GYS1 SPACA4 GRWD1 SNORD33 SNORD32A SIGLEC11 LOC101059948 MIR4749 SNAR-A6 SNORD35B BSPH1 RRAS SNAR-B2 PRR12 PRMT1 NTN5 |
nsv833863 | Chr.19:49479177 - 49629716 on Build GRCh38 | Loss | RPS11 FLT3LG SNORD33 SNORD34 SNORD32A PRRG2 RCN3 NOSIP SNORD35A SNORD35B RPL13A FCGRT PRR12 MIR150 |
nsv833862 | Chr.19:49448789 - 49570676 on Build GRCh38 | Loss | RPS11 FLT3LG SNORD33 SNORD34 SNORD32A RCN3 ALDH16A1 NOSIP SNORD35A SNORD35B RPL13A FCGRT MIR150 PIH1D1 |
nsv1160655 | Chr.19:49489110 - 49841830 on Build GRCh38 | Deletion | RPS11 ADM5 TSKS AP2A1 MIR6800 PRRG2 RCN3 PTOV1-AS1 IRF3 NOSIP SNORD35A MIR5088 BCL2L12 CPT1C FUZ SNORD33 SNORD34 SNORD32A SNORD35B MED25 RPL13A RRAS FCGRT PRR12 PRMT1 MIR6799 SCAF1 MIR150 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |