Assay Details
Target Gene Details
Entrez Gene ID: | 60343 |
Gene Name: | family with sequence similarity 3 member A |
Gene Aliases: |
2.19, DLD, DXS560S, XAP-7 |
Location: |
Chr.X:154506159-154516249 on Build GRCh38 |
Assay Gene Location: | Within Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FAM3A | NM_001171132.2 | 10 | 1307 | NP_001164603.1 |
NM_001171133.2 | 9 | 1193 | NP_001164604.1 | |
NM_001171134.2 | 8 | 1353 | NP_001164605.1 | |
NM_001282311.1 | 10 | 1502 | NP_001269240.1 | |
NM_001282312.1 | 10 | 1248 | NP_001269241.1 | |
NM_021806.3 | 9 | 1404 | NP_068578.2 | |
XM_005274714.3 | 11 | 1373 | XP_005274771.1 | |
XM_005274716.3 | 11 | 1352 | XP_005274773.1 | |
XM_005277879.4 | 9 | 1262 | XP_005277936.1 | |
XM_006724831.2 | 11 | 1376 | XP_006724894.1 | |
XM_006724832.3 | 10 | 1337 | XP_006724895.1 | |
XM_006724833.2 | 10 | 1301 | XP_006724896.1 | |
XM_006724834.2 | 10 | 1489 | XP_006724897.1 | |
XM_011531185.2 | 8 | 934 | XP_011529487.1 | |
XM_017029699.1 | 9 | 1649 | XP_016885188.1 | |
XM_017029700.1 | 9 | 1624 | XP_016885189.1 | |
XM_017029701.1 | 10 | 1527 | XP_016885190.1 | |
XM_017029702.1 | 9 | 1140 | XP_016885191.1 | |
AK024601.1 | 10 | 1265 | ||
AK057945.1 | 10 | 1122 | ||
AK124890.1 | 6 | 3595 | ||
AK294116.1 | ||||
BC002934.1 | 10 | 1406 | AAH02934.1 | |
BC008912.2 | 9 | 1055 | AAH08912.1 | |
X74610.1 | 1 | 98 | ||
X87193.1 | 9 | 1211 | CAA60645.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv33784 | Chr.X:153962665 - 155699588 on Build GRCh38 | Gain+Loss | TKTL1 MTCP1 TMLHE-AS1 EMD CH17-340M24.3 FAM3A FAM223B HCFC1 OPN1LW MIR6858 CTAG1A F8 ATP6AP1 SNORA36A SNORA56 MECP2 TMLHE OPN1MW TAZ SMIM9 CTAG1B BRCC3 F8A3 CLIC2 F8A1 H2AFB3 LOC101927830 MIR3202-1 G6PD MIR718 MIR1184-1 F8A2 SNORA70 IKBKG LAGE3 OPN1MW2 FUNDC2 HCFC1-AS1 VBP1 RPL10 MIR3202-2 FAM223A CTAG2 CMC4 LOC105373386 OPN1MW3 FAM50A GAB3 FLNA TEX28 H2AFB2 SPRY3 PLXNA3 GDI1 H2AFB1 MIR1184-2 MIR664B MIR1184-3 DNASE1L1 SLC10A3 LOC107987332 MPP1 RAB39B TMEM187 IRAK1 UBL4A DKC1 |
nsv519042 | Chr.X:154082978 - 154601444 on Build GRCh38 | Gain | TKTL1 RPL10 EMD FAM223A CH17-340M24.3 FAM3A OPN1LW MIR6858 LOC105373386 OPN1MW3 CTAG1A FAM50A FLNA TEX28 ATP6AP1 PLXNA3 MECP2 GDI1 OPN1MW TAZ DNASE1L1 SLC10A3 LOC107987332 G6PD SNORA70 IKBKG LAGE3 OPN1MW2 UBL4A |
esv33199 | Chr.X:153065734 - 154591978 on Build GRCh38 | Gain+Loss | TKTL1 EMD LOC105373378 PNMA6A LOC105373383 CH17-340M24.3 FAM3A HCFC1 OPN1LW LOC107983954 MIR6858 PDZD4 CTAG1A SSR4 ATP6AP1 ZFP92 MECP2 OPN1MW TAZ PNCK LOC105373381 IDH3G L1CAM SRPK3 MIR3202-1 SLC6A8 G6PD MIR718 SNORA70 BGN IKBKG LAGE3 OPN1MW2 HCFC1-AS1 BCAP31 RPL10 MIR3202-2 LCA10 FAM223A TREX2 LOC105373386 OPN1MW3 FAM50A FLNA TEX28 LOC105373377 PLXNA3 AVPR2 PLXNB3 GDI1 MAGEA1 RENBP ABCD1 DNASE1L1 SLC10A3 LOC107987332 ATP2B3 HAUS7 NAA10 DUSP9 ARHGAP4 ZNF275 TMEM187 FAM58A IRAK1 UBL4A |
nsv508816 | Chr.X:154492171 - 154591783 on Build GRCh38 | Insertion | IKBKG FAM223A FAM3A CTAG1A G6PD |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |