Assay Details
Target Gene Details
Entrez Gene ID: | 63935 |
Gene Name: | PDX1 C-terminal inhibiting factor 1 |
Gene Aliases: |
C20orf67, PPP1R121 |
Location: |
Chr.20:45934674-45948023 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 6 - Intron 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCIF1 | NM_022104.3 | NP_071387.1 | ||
XM_011528980.2 | XP_011527282.1 | |||
XM_011528981.2 | XP_011527283.1 | |||
XM_017028013.1 | XP_016883502.1 | |||
XM_017028014.1 | XP_016883503.1 | |||
AB050014.1 | BAC45238.1 | |||
AK299435.1 | ||||
BC010005.2 | AAH10005.1 | |||
BC013365.2 | AAH13365.1 | |||
BQ684226.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv833991 | Chr.20:45885631 - 46068708 on Build GRCh38 | Loss | SLC12A5 PLTP SPATA25 NEURL2 MMP9 NCOA5 LOC107985388 ZNF335 CTSA PCIF1 |
nsv517296 | Chr.20:45854586 - 45965936 on Build GRCh38 | Loss | PLTP SPATA25 ZSWIM1 NEURL2 ZSWIM3 ACOT8 LOC107985388 ZNF335 CTSA PCIF1 |
nsv833990 | Chr.20:45771510 - 45946844 on Build GRCh38 | Loss | PLTP SPATA25 ZSWIM1 TNNC2 ACOT8 LOC107985388 PCIF1 UBE2C DNTTIP1 NEURL2 WFDC3 SNX21 ZSWIM3 CTSA |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |