Hs01210475_cn

• Gene Symbol: SCLY
• Assay Reference Genome Location: Chr.2:238069323 on build GRCh38
• Cytoband: 2q37.3

Target Gene Details

• Entrez Gene ID: 51540
• Gene Name: selenocysteine lyase
• Gene Aliases: SCL, hSCL
• Location: Chr.2:238060924-238099413 on Build GRCh38
• Assay Gene Location: Overlaps Intron 3 - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SCLY	NM_016510.5			NP_057594.4
	AB209458.2			BAD92695.1
	AF175767.1			AAF36816.1
	AK293283.1
	AK298409.1
	AK301009.1
	BC000586.2			AAH00586.2
	BC007891.2			AAH07891.1
	DN995828.1

Target Gene Details

• Entrez Gene ID: 100533179
• Gene Name: UBE2F-SCLY readthrough (NMD candidate)
• Gene Aliases: -
• Location: Chr.2:237966945-238099413 on Build GRCh38
• Assay Gene Location: Overlaps Intron 10 - Exon 11

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
UBE2F-SCLY	NR_037904.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1000252	Chr.2:235899999 - 238766417 on Build GRCh38	Loss	LOC105373958 PER2 ERFE RBM44 COPS8 HES6 IQCA1 LRRFIP1 LOC105373944 LOC101927958 AGAP1 SCLY ASB18 MIR6811 LOC151174 LOC93463 RAB17 LOC105373991 MLPH ILKAP GBX2 UBE2F-SCLY UBE2F ACKR3 RAMP1 KLHL30 LINC01107 TRAF3IP1 LOC643387 COL6A3 ASB1 PRLH ESPNL

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

lyase, metabolite interconversion enzyme

Gene Ontology Categories:

Process(es)

selenium compound metabolic process
cellular amino acid metabolic process

Function(s)

protein binding
selenocysteine lyase activity
transferase activity