Assay Details
Target Gene Details
Entrez Gene ID: | 3356 |
Gene Name: | 5-hydroxytryptamine receptor 2A |
Gene Aliases: |
5-HT2A, HTR2 |
Location: |
Chr.13:46831542-46897076 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HTR2A | NM_000621.4 | 4 | 1623 | NP_000612.1 |
NM_001165947.2 | 3 | 883 | NP_001159419.1 | |
A23337.1 | 3 | 1099 | CAA01675.1 | |
AF498982.1 | 3 | 892 | AAM21129.1 | |
AK302787.1 | 3 | 722 | ||
AK314132.1 | 4 | 1380 | ||
BC069356.1 | 3 | 971 | AAH69356.1 | |
BC069576.1 | 3 | 971 | AAH69576.1 | |
BC074848.2 | 3 | 919 | AAH74848.1 | |
BC074849.2 | 3 | 919 | AAH74849.1 | |
BC096839.1 | 3 | 893 | AAH96839.1 | |
BX647777.1 | 3 | 667 | ||
M86841.1 | 3 | 868 | AAA58354.1 | |
S71229.1 | 3 | 942 | AAB31320.1 | |
X57830.1 | 3 | 1037 | CAA40963.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1027 | Chr.13:46802456 - 46835423 on Build GRCh38 | Insertion | HTR2A |
esv2763019 | Chr.13:46774094 - 47549312 on Build GRCh38 | Loss | HTR2A-AS1 ESD HTR2A |
More Information
Additional Information:
For this assay, SNP(s) [rs146528709] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |