Assay Details
Target Gene Details
Entrez Gene ID: | 6560 |
Gene Name: | solute carrier family 12 member 4 |
Gene Aliases: |
CTC-479C5.17, KCC1, hKCC1 |
Location: |
Chr.16:67943474-67968694 on Build GRCh38 |
Assay Gene Location: | Within Exon 26 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC12A4 | NM_001145961.1 | 24 | 3574 | NP_001139433.1 |
NM_001145962.1 | 23 | 3497 | NP_001139434.1 | |
NM_001145963.1 | 24 | 3471 | NP_001139435.1 | |
NM_001145964.1 | 24 | 3462 | NP_001139436.1 | |
NM_005072.4 | 24 | 3592 | NP_005063.1 | |
AF047338.1 | 24 | 3451 | AAC32815.1 | |
AF054505.1 | 23 | 3599 | AAC39684.1 | |
AF054506.1 | 23 | 3606 | AAC39685.1 | |
AK026911.1 | 16 | 2230 | ||
AK097808.1 | 17 | 2200 | ||
AK293906.1 | 24 | 3483 | ||
AK293956.1 | 23 | 3387 | ||
AK299042.1 | 24 | 3378 | ||
AK302790.1 | 24 | 3471 | ||
BC021193.2 | 24 | 3520 | AAH21193.1 | |
CF272417.1 | 2 | 313 | ||
U55054.1 | 24 | 3506 | AAC50563.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv522852 | Chr.16:67153308 - 68071571 on Build GRCh38 | Gain | THAP11 LCAT DPEP2 FHOD1 EXOC3L1 LRRC36 LOC105369155 AGRP HSF4 TMEM208 PARD6A CTRL PLEKHG4 TRADD ENKD1 LOC100131303 RANBP10 CTCF CENPT E2F4 C16orf86 PSKH1 FBXL8 FAM65A NRN1L HSD11B2 DPEP3 DUS2 ZDHHC1 KCTD19 LOC107984813 TSNAXIP1 DDX28 SLC9A5 CARMIL2 LRRC29 NUTF2 PSMB10 GFOD2 ATP6V0D1 ELMO3 MIR328 TPPP3 SLC12A4 EDC4 NOL3 ACD KIAA0895L LOC100505942 |
nsv524363 | Chr.16:67136529 - 68071571 on Build GRCh38 | Loss | THAP11 LCAT DPEP2 FHOD1 EXOC3L1 LRRC36 LOC105369155 AGRP HSF4 TMEM208 PARD6A CTRL PLEKHG4 TRADD ENKD1 LOC100131303 RANBP10 CTCF CENPT E2F4 C16orf86 PSKH1 C16orf70 FBXL8 FAM65A B3GNT9 NRN1L HSD11B2 DPEP3 DUS2 ZDHHC1 KCTD19 LOC107984813 TSNAXIP1 DDX28 SLC9A5 CARMIL2 LRRC29 NUTF2 PSMB10 GFOD2 ATP6V0D1 ELMO3 MIR328 TPPP3 SLC12A4 EDC4 NOL3 ACD KIAA0895L LOC100505942 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |