Assay Details
Target Gene Details
Entrez Gene ID: | 823 |
Gene Name: | calpain 1 |
Gene Aliases: |
CANP, CANP1, CANPL1, SPG76, muCANP, muCL |
Location: |
Chr.11:65181215-65212006 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 22 - Intron 23 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CAPN1 | NM_001198868.1 | NP_001185797.1 | ||
NM_001198869.1 | NP_001185798.1 | |||
NM_005186.3 | NP_005177.2 | |||
NR_040008.1 | ||||
XM_006718698.1 | XP_006718761.1 | |||
XM_011545292.1 | XP_011543594.1 | |||
AK025380.1 | ||||
AK097277.1 | ||||
AK301538.1 | ||||
AK315556.1 | ||||
AY550975.1 | AAT52221.1 | |||
BC008751.2 | AAH08751.1 | |||
BC017200.2 | AAH17200.1 | |||
BC075862.1 | AAH75862.1 | |||
X04366.1 | CAA27881.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv832190 | Chr.11:65210673 - 65360142 on Build GRCh38 | Loss | CAPN1 SLC22A20 DPF2 TIGD3 POLA2 CDC42EP2 |
nsv526181 | Chr.11:64870569 - 65489858 on Build GRCh38 | Gain | SPDYC NAALADL1 BATF2 SNX15 DPF2 MRPL49 SLC25A45 ZNHIT2 LOC101927789 CDC42EP2 ARL2-SNX15 SYVN1 ZFPL1 VPS51 FAU EHD1 GPHA2 MIR6751 CDCA5 CAPN1 MIR6749 FRMD8 ARL2 TIGD3 PPP2R5B SAC3D1 MIR194-2HG MIR192 MIR6750 TMEM262 POLA2 MIR6879 MIR194-2 MIR612 SLC22A20 MAJIN TM7SF2 NEAT1 ATG2A |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |