Assay Details
Target Gene Details
Entrez Gene ID: | 3931 |
Gene Name: | lecithin-cholesterol acyltransferase |
Gene Aliases: |
- |
Location: |
Chr.16:67939884-67944112 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LCAT | NM_000229.1 | 2 | 232 | NP_000220.1 |
BC014781.1 | 2 | 222 | AAH14781.1 | |
BT009748.1 | 2 | 221 | AAP88750.1 | |
M12625.1 | 2 | 488 | AAA59498.1 | |
M26268.1 | 2 | 174 | AAA59499.1 | |
X06537.1 | 2 | 324 | CAB56610.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv522852 | Chr.16:67153308 - 68071571 on Build GRCh38 | Gain | ACD LOC107984813 CENPT MIR328 CTRL KCTD19 CARMIL2 FBXL8 DDX28 PSMB10 LCAT PARD6A TSNAXIP1 EXOC3L1 GFOD2 SLC12A4 ELMO3 TPPP3 ATP6V0D1 ENKD1 LRRC36 C16orf86 SLC9A5 HSD11B2 NRN1L LOC105369155 DPEP3 DPEP2 EDC4 LRRC29 AGRP KIAA0895L LOC100131303 THAP11 FAM65A FHOD1 DUS2 NUTF2 TMEM208 E2F4 LOC100505942 PLEKHG4 TRADD NOL3 HSF4 ZDHHC1 CTCF RANBP10 PSKH1 |
nsv524363 | Chr.16:67136529 - 68071571 on Build GRCh38 | Loss | ACD LOC107984813 CENPT MIR328 CTRL KCTD19 CARMIL2 FBXL8 DDX28 PSMB10 LCAT C16orf70 PARD6A TSNAXIP1 EXOC3L1 GFOD2 SLC12A4 ELMO3 TPPP3 ATP6V0D1 ENKD1 LRRC36 C16orf86 SLC9A5 HSD11B2 NRN1L LOC105369155 B3GNT9 DPEP3 DPEP2 EDC4 LRRC29 AGRP KIAA0895L LOC100131303 THAP11 FAM65A FHOD1 DUS2 NUTF2 TMEM208 E2F4 LOC100505942 PLEKHG4 TRADD NOL3 HSF4 ZDHHC1 CTCF RANBP10 PSKH1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |