Assay Details
Target Gene Details
Entrez Gene ID: | 22909 |
Gene Name: | FANCD2/FANCI-associated nuclease 1 |
Gene Aliases: |
KIAA1018, KMIN, MTMR15, hFAN1 |
Location: |
Chr.15:30903695-30943108 on Build GRCh38 |
Assay Gene Location: | Within Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FAN1 | NM_001146094.1 | 4 | 1788 | NP_001139566.1 |
NM_001146095.1 | 4 | 1685 | NP_001139567.1 | |
NM_001146096.1 | 4 | 1801 | NP_001139568.1 | |
NM_014967.4 | 4 | 1788 | NP_055782.3 | |
XM_005254232.4 | 4 | 1796 | XP_005254289.1 | |
XM_005254234.4 | 4 | 1842 | XP_005254291.1 | |
XM_005254235.3 | 4 | 1678 | XP_005254292.1 | |
XM_011521370.2 | 4 | 481 | XP_011519672.1 | |
XM_011521371.1 | 5 | 1907 | XP_011519673.1 | |
XM_011521372.2 | 4 | 1792 | XP_011519674.1 | |
XM_017022012.1 | XP_016877501.1 | |||
XM_017022013.1 | XP_016877502.1 | |||
AB023235.2 | 4 | 1735 | ||
AK290987.1 | 4 | 1768 | ||
BC047882.1 | 4 | 1688 | AAH47882.1 | |
BX647391.1 | 4 | 1782 | ||
CR936727.1 | 5 | 1902 | ||
CR936734.1 | 4 | 1758 | ||
HM560957.1 | 3 | 1497 | ||
KJ534972.1 | 3 | 1497 | ||
KJ534973.1 | 3 | 1497 | ||
KJ535046.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv832951 | Chr.15:30839036 - 31012266 on Build GRCh38 | Loss | TRPM1 FAN1 MTMR10 |
nsv525795 | Chr.15:30644082 - 31032328 on Build GRCh38 | Gain | TRPM1 LOC100288637 HERC2P10 LOC107984025 FAN1 LOC101930434 MTMR10 |
esv3569376 | Chr.15:30781533 - 30987140 on Build GRCh38 | Gain | HERC2P10 LOC107984025 FAN1 LOC101930434 MTMR10 |
esv33507 | Chr.15:30891121 - 31178820 on Build GRCh38 | Loss | TRPM1 MIR211 FAN1 MTMR10 |
nsv521842 | Chr.15:30848497 - 30980467 on Build GRCh38 | Gain | FAN1 MTMR10 |
nsv1046874 | Chr.15:30715930 - 31002451 on Build GRCh38 | Gain | TRPM1 LOC100288637 HERC2P10 LOC107984025 FAN1 LOC101930434 MTMR10 |
esv3636036 | Chr.15:30818302 - 31038636 on Build GRCh38 | Gain | TRPM1 HERC2P10 FAN1 MTMR10 |
esv3892649 | Chr.15:30905361 - 30918448 on Build GRCh38 | Loss | FAN1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |