Assay Details
Target Gene Details
Entrez Gene ID: | 79048 |
Gene Name: | SECIS binding protein 2 |
Gene Aliases: |
SBP2 |
Location: |
Chr.9:89318473-89367117 on Build GRCh38 |
Assay Gene Location: |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SECISBP2 |
Target Gene Details
Entrez Gene ID: | 10507 |
Gene Name: | semaphorin 4D |
Gene Aliases: |
C9orf164, CD100, M-sema-G, SEMAJ, coll-4 |
Location: |
Chr.9:89360791-89498065 on Build GRCh38 |
Assay Gene Location: | Within Intron 26 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SEMA4D | NM_001142287.1 | NP_001135759.1 | ||
AK090804.1 | ||||
AK091601.1 | ||||
AK097056.1 | 1 | 501 | BAC04938.1 | |
AK128342.1 | 1 | 1504 | ||
AK293749.1 | ||||
AK316107.1 | ||||
BC137515.1 | 1 | 76 | ||
BC137518.1 | 1 | 76 | ||
DT220478.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3621014 | Chr.9:88877891 - 89641453 on Build GRCh38 | Gain | SEMA4D SHC3 S1PR3 MIR3153 CKS2 C9orf47 GADD45G UNQ6494 SECISBP2 |
esv29434 | Chr.9:89348488 - 89728467 on Build GRCh38 | Gain+Loss | SEMA4D LOC102724237 GADD45G UNQ6494 SECISBP2 |
nsv1041327 | Chr.9:89298100 - 89438209 on Build GRCh38 | Gain | SEMA4D MIR3153 CKS2 SECISBP2 |
More Information
Additional Information:
For this assay, SNP(s) [rs77132503] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |