Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	56114
Gene Name:	protocadherin gamma subfamily A, 1
Gene Aliases:	PCDH-GAMMA-A1
Location:	Chr.5:141330685-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGA1	NM_018912.2			NP_061735.1
PCDHGA1	AF152318.1			AAD43712.1

Target Gene Details

Entrez Gene ID:	56106
Gene Name:	protocadherin gamma subfamily A, 10
Gene Aliases:	PCDH-GAMMA-A10
Location:	Chr.5:141413176-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGA10	NM_018913.2			NP_061736.1
PCDHGA10	AF152319.1			AAD43713.1

Target Gene Details

Entrez Gene ID:	56105
Gene Name:	protocadherin gamma subfamily A, 11
Gene Aliases:	PCDH-GAMMA-A11
Location:	Chr.5:141420970-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Protein ID
PCDHGA11	NM_018914.2	NP_061737.1
	NM_032092.1	NP_114481.1
	AF152320.1	AAD43714.1
	AF152504.1	AAD43765.1
	BC136781.1
	BC171774.1

Target Gene Details

Entrez Gene ID:	26025
Gene Name:	protocadherin gamma subfamily A, 12
Gene Aliases:	CDH21, FIB3, PCDH-GAMMA-A12
Location:	Chr.5:141430591-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Protein ID
PCDHGA12	NM_003735.2	NP_003726.1
	AB011160.1
	AF152321.1	AAD43715.1

Target Gene Details

Entrez Gene ID:	56113
Gene Name:	protocadherin gamma subfamily A, 2
Gene Aliases:	PCDH-GAMMA-A2
Location:	Chr.5:141338760-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGA2	NM_018915.3			NP_061738.1
PCDHGA2	AF152322.1			AAD43716.1

Target Gene Details

Entrez Gene ID:	56112
Gene Name:	protocadherin gamma subfamily A, 3
Gene Aliases:	PCDH-GAMMA-A3
Location:	Chr.5:141344034-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Protein ID
PCDHGA3	NM_018916.3	NP_061739.2
	AB208927.1	BAD92164.1
	AF152323.1	AAD43717.1

Target Gene Details

Entrez Gene ID:	56111
Gene Name:	protocadherin gamma subfamily A, 4
Gene Aliases:	PCDH-GAMMA-A4
Location:	Chr.5:141355025-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGA4	NM_018917.3			NP_061740.2
PCDHGA4	AF152324.1			AAD43718.1

Target Gene Details

Entrez Gene ID:	56110
Gene Name:	protocadherin gamma subfamily A, 5
Gene Aliases:	CDH-GAMMA-A5, ME3, PCDH-GAMMA-A5
Location:	Chr.5:141364331-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGA5	NM_018918.2			NP_061741.1
PCDHGA5	AF152325.1			AAD43719.1

Target Gene Details

Entrez Gene ID:	56109
Gene Name:	protocadherin gamma subfamily A, 6
Gene Aliases:	PCDH-GAMMA-A6
Location:	Chr.5:141374084-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Protein ID
PCDHGA6	NM_018919.2	NP_061742.1
	AB209178.1	BAD92415.1
	AF152326.1	AAD43720.1
	BC146651.1

Target Gene Details

Entrez Gene ID:	56108
Gene Name:	protocadherin gamma subfamily A, 7
Gene Aliases:	PCDH-GAMMA-A7
Location:	Chr.5:141382739-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Protein ID
PCDHGA7	NM_018920.3	NP_061743.1
	AB208958.1	BAD92195.1
	AF152327.1	AAD43721.1

Target Gene Details

Entrez Gene ID:	9708
Gene Name:	protocadherin gamma subfamily A, 8
Gene Aliases:	PCDH-GAMMA-A8
Location:	Chr.5:141391916-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGA8	NM_032088.1			NP_114477.1
PCDHGA8	AF152328.1			AAD43722.1

Target Gene Details

Entrez Gene ID:	56107
Gene Name:	protocadherin gamma subfamily A, 9
Gene Aliases:	PCDH-GAMMA-A9
Location:	Chr.5:141402953-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGA9	NM_018921.2			NP_061744.1
PCDHGA9	AF152329.1			AAD43723.1

Target Gene Details

Entrez Gene ID:	56104
Gene Name:	protocadherin gamma subfamily B, 1
Gene Aliases:	PCDH-GAMMA-B1
Location:	Chr.5:141350261-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGB1	NM_018922.2			NP_061745.1
PCDHGB1	AF152330.1			AAD43724.1

Target Gene Details

Entrez Gene ID:	56103
Gene Name:	protocadherin gamma subfamily B, 2
Gene Aliases:	PCDH-GAMMA-B2
Location:	Chr.5:141360136-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGB2	NM_018923.2			NP_061746.1
PCDHGB2	AF152331.1			AAD43725.1

Target Gene Details

Entrez Gene ID:	56102
Gene Name:	protocadherin gamma subfamily B, 3
Gene Aliases:	PCDH-GAMMA-B3
Location:	Chr.5:141370264-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Protein ID
PCDHGB3	NM_018924.4	NP_061747.2
	AF152332.1	AAD43726.1
	BC150172.1

Target Gene Details

Entrez Gene ID:	8641
Gene Name:	protocadherin gamma subfamily B, 4
Gene Aliases:	CDH20, FIB2, PCDH-GAMMA-B4
Location:	Chr.5:141387885-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGB4	NM_003736.2			NP_003727.1
PCDHGB4	AF152333.1			AAD43727.1

Target Gene Details

Entrez Gene ID:	56101
Gene Name:	protocadherin gamma subfamily B, 5
Gene Aliases:	PCDH-GAMMA-B5
Location:	Chr.5:141398128-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGB5	NM_018925.2			NP_061748.1
PCDHGB5	AF152334.1			AAD43728.1

Target Gene Details

Entrez Gene ID:	56100
Gene Name:	protocadherin gamma subfamily B, 6
Gene Aliases:	PCDH-GAMMA-B6
Location:	Chr.5:141408203-141512979 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGB6	NM_018926.2			NP_061749.1
PCDHGB6	AF152335.1			AAD43729.1

Target Gene Details

Entrez Gene ID:	56099
Gene Name:	protocadherin gamma subfamily B, 7
Gene Aliases:	ME6, PCDH-GAMMA-B7
Location:	Chr.5:141417647-141512981 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Protein ID
PCDHGB7	NM_018927.3	NP_061750.1
	AF152336.1	AAD43730.1
	BC051788.2	AAH51788.1

Target Gene Details

Entrez Gene ID:	5098
Gene Name:	protocadherin gamma subfamily C, 3
Gene Aliases:	PC43, PCDH-GAMMA-C3, PCDH2
Location:	Chr.5:141476002-141512977 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Protein ID
PCDHGC3	NM_002588.3	NP_002579.2
	NM_032403.2	NP_115779.1
	AF152337.1	AAD43731.1
	BC006439.1	AAH06439.1
	BC019299.1	AAH19299.1
	BC026218.1	AAH26218.1
	BC027451.1	AAH27451.1
	BC063437.1	AAH63437.1
	BG765565.1
	L11373.1	AAA75391.1

Target Gene Details

Entrez Gene ID:	56098
Gene Name:	protocadherin gamma subfamily C, 4
Gene Aliases:	PCDH-GAMMA-C4
Location:	Chr.5:141485174-141512979 on Build GRCh38
Assay Gene Location:	Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGC4	NM_018928.2	1	1205	NP_061751.1
	NM_032406.1	1	1205	NP_115782.1
	AF152338.1	1	1205	AAD43732.1
	AF152525.1	1	1205	AAD43785.1
	BC101035.1	1	1205	AAI01036.1
	BC101036.1	1	1202
	BC101038.2	1	1205	AAI01039.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv462470	Chr.5:141482234 - 141513076 on Build GRCh38	Loss	PCDHGA1 PCDHGB2 PCDHGA2 PCDHGC4 PCDHGA3 PCDHGA9 PCDHGA11 PCDHGA8 PCDHGA4 PCDHGA5 PCDHGB7 PCDHGA6 PCDHGB6 PCDHGC5 PCDHGC3 PCDHGA12 PCDHGB5 PCDHGA10 PCDHGB3 PCDHGB4 PCDHGA7 PCDHGB1

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More Information

Set Membership:

Intragenic

Exonic

Intronic

Non-exonic

DGV Variation

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Function(s) Process(es)

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System Message

Genomic Map

Assay Details

Target Gene Details

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