Hs00880110_cn

• Gene Symbol: DDX39A
• Assay Reference Genome Location: Chr.19:14409050 on build GRCh38
• Cytoband: 19p13.12

Target Gene Details

• Entrez Gene ID: 10212
• Gene Name: DEAD-box helicase 39A
• Gene Aliases: BAT1, BAT1L, DDX39, DDXL, URH49
• Location: Chr.19:14408798-14419383 on Build GRCh38
• Assay Gene Location: Overlaps Intron 12 - Exon 12

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
DDX39A	NM_005804.3			NP_005795.2
	NR_046366.2
	XM_006722606.3			XP_006722669.1
	XM_011527620.1			XP_011525922.1
	XM_011527621.2			XP_011525923.1
	AK301847.1
	AL512698.1			CAH10601.1
	BC001009.2			AAH01009.1
	BC032128.2			AAH32128.1
	BM792110.1
	U90426.1			AAB50231.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1160590	Chr.19:14398750 - 14462842 on Build GRCh38	Deletion	DDX39A PKN1 ADGRE5
nsv833764	Chr.19:14381787 - 14504061 on Build GRCh38	Loss	DDX39A PKN1 ADGRE5 GIPC1 SNRPGP15 PTGER1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

mRNA splicing, via spliceosome
termination of RNA polymerase II transcription
RNA export from nucleus
mRNA export from nucleus
cellular response to DNA damage stimulus
regulation of gene expression
RNA secondary structure unwinding
mRNA 3'-end processing

Function(s)

ATP-dependent RNA helicase activity
protein binding
ATP binding
ATPase activity
poly(A) RNA binding