Assay Details
Target Gene Details
Entrez Gene ID: | 144108 |
Gene Name: | SPT2 chromatin protein domain containing 1 |
Gene Aliases: |
Spt2 |
Location: |
Chr.11:18606401-18634823 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SPTY2D1 | NM_194285.2 | 3 | 1595 | NP_919261.2 |
XM_011519919.2 | 3 | 1453 | XP_011518221.1 | |
AF452716.1 | 1 | 989 | AAP13351.1 | |
AK096760.1 | 3 | 1615 | BAC04858.1 | |
AK304078.1 | 3 | 1511 | ||
BC036844.1 | 1 | 215 | AAH36844.1 | |
BC056261.1 | AAH56261.1 | |||
BX538046.1 | CAD97985.1 | |||
BX641102.1 | 3 | 1496 | CAE46047.1 | |
BX647798.1 | 3 | 1595 | ||
BX648114.1 | 1 | 1174 | CAH10772.1 | |
BX648478.1 | 3 | 1517 | ||
CR749626.1 | 1 | 1038 | CAH18420.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv553633 | Chr.11:18290154 - 19036904 on Build GRCh38 | Gain | PTPN5 MIR3159 IGSF22 LDHC TMEM86A SPTY2D1 MRGPRX1 GTF2H1 LDHAL6A SPTY2D1-AS1 HPS5 TSG101 LDHA UEVLD |
nsv516413 | Chr.11:18606871 - 18622211 on Build GRCh38 | Loss | SPTY2D1-AS1 SPTY2D1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |