Assay Details
Target Gene Details
Entrez Gene ID: | 57657 |
Gene Name: | hyperpolarization activated cyclic nucleotide gated potassium channel 3 |
Gene Aliases: |
- |
Location: |
Chr.1:155277427-155289848 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HCN3 | NM_020897.2 | 2 | 595 | NP_065948.1 |
NR_073074.1 | 2 | 595 | ||
XM_011509816.2 | 2 | 1113 | XP_011508118.1 | |
XM_011509817.2 | 2 | 595 | XP_011508119.1 | |
AB040968.2 | 2 | 244 | BAA96059.2 | |
AF488550.1 | 2 | 439 | AAO49470.1 | |
AK055840.1 | 2 | 323 | ||
AK299333.1 | 2 | 568 | ||
DA127524.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv831636 | Chr.1:155249432 - 155475073 on Build GRCh38 | Loss | CLK2 FAM189B FDPS POU5F1P4 RUSC1 SCAMP3 HCN3 MIR555 RUSC1-AS1 LOC105371451 PKLR ASH1L |
esv33869 | Chr.1:155253492 - 155948170 on Build GRCh38 | Loss | CLK2 MSTO2P KIAA0907 LOC100505728 MIR555 SYT11 RUSC1-AS1 PKLR SCARNA4 MSTO1 ASH1L-AS1 DAP3 ASH1L RXFP4 FAM189B FDPS POU5F1P4 RUSC1 SCAMP3 ARHGEF2 RIT1 SNORA80E YY1AP1 GON4L SCARNA26B SCARNA26A HCN3 LOC105371451 |
nsv952214 | Chr.1:155279610 - 155304509 on Build GRCh38 | Deletion | HCN3 PKLR |
nsv436027 | Chr.1:155260761 - 155291532 on Build GRCh38 | Insertion | CLK2 SCAMP3 HCN3 PKLR |
esv23319 | Chr.1:155257268 - 155292883 on Build GRCh38 | Gain | CLK2 SCAMP3 HCN3 PKLR |
dgv3n68 | Chr.1:155122502 - 155343618 on Build GRCh38 | Loss | CLK2 DPM3 FAM189B FDPS RUSC1 SCAMP3 SLC50A1 MIR92B RUSC1-AS1 PKLR MTX1 TRIM46 MUC1 HCN3 KRTCAP2 GBAP1 GBA EFNA1 LOC105371451 THBS3 ASH1L |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |