Assay Details
Target Gene Details
Entrez Gene ID: | 57657 |
Gene Name: | hyperpolarization activated cyclic nucleotide gated potassium channel 3 |
Gene Aliases: |
- |
Location: |
Chr.1:155277427-155289848 on Build GRCh38 |
Assay Gene Location: | Within Exon 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HCN3 | NM_020897.2 | 8 | 3052 | NP_065948.1 |
XM_011509816.2 | 8 | 3570 | XP_011508118.1 | |
XM_011509817.2 | 7 | 2890 | XP_011508119.1 | |
XM_011509818.2 | 7 | 2282 | XP_011508120.1 | |
XM_017001918.1 | 7 | 2264 | XP_016857407.1 | |
AB040968.2 | 8 | 2701 | BAA96059.2 | |
AK055840.1 | ||||
BC000066.1 | 7 | 2280 | AAH00066.1 | |
BC028024.1 | 5 | 1917 | AAH28024.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv3032 | Chr.1:155285619 - 155318185 on Build GRCh38 | Insertion | LOC105371451 PKLR FDPS HCN3 |
nsv831636 | Chr.1:155249432 - 155475073 on Build GRCh38 | Loss | LOC105371451 ASH1L FAM189B POU5F1P4 PKLR FDPS SCAMP3 RUSC1 CLK2 HCN3 RUSC1-AS1 MIR555 |
esv33869 | Chr.1:155253492 - 155948170 on Build GRCh38 | Loss | SNORA80E ASH1L POU5F1P4 RXFP4 SCARNA4 MSTO1 SCARNA26A SCARNA26B KIAA0907 LOC105371451 YY1AP1 PKLR FDPS RUSC1 RUSC1-AS1 MIR555 MSTO2P ARHGEF2 FAM189B DAP3 SCAMP3 LOC100505728 RIT1 SYT11 GON4L CLK2 HCN3 ASH1L-AS1 |
nsv952214 | Chr.1:155279610 - 155304509 on Build GRCh38 | Deletion | PKLR HCN3 |
nsv436027 | Chr.1:155260761 - 155291532 on Build GRCh38 | Insertion | PKLR SCAMP3 CLK2 HCN3 |
esv23319 | Chr.1:155257268 - 155292883 on Build GRCh38 | Gain | PKLR SCAMP3 CLK2 HCN3 |
dgv3n68 | Chr.1:155122502 - 155343618 on Build GRCh38 | Loss | MTX1 ASH1L FAM189B EFNA1 DPM3 KRTCAP2 SCAMP3 TRIM46 GBAP1 GBA LOC105371451 MIR92B PKLR FDPS MUC1 RUSC1 CLK2 HCN3 SLC50A1 RUSC1-AS1 THBS3 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |