Assay Details
Target Gene Details
Entrez Gene ID: | 29855 |
Gene Name: | ubinuclein 1 |
Gene Aliases: |
VT, VT4 |
Location: |
Chr.16:4846665-4882401 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
UBN1 | NM_001079514.2 | 2 | 776 | NP_001072982.1 |
NM_001288656.1 | 1 | 210 | NP_001275585.1 | |
XM_005255277.3 | 2 | 961 | XP_005255334.1 | |
XM_005255278.3 | 2 | 1925 | XP_005255335.1 | |
XM_005255279.3 | 2 | 961 | XP_005255336.1 | |
XM_011522465.1 | 2 | 961 | XP_011520767.1 | |
XM_011522467.1 | 2 | 961 | XP_011520769.1 | |
XM_017023189.1 | 2 | 961 | XP_016878678.1 | |
XM_017023190.1 | 2 | 961 | XP_016878679.1 | |
XM_017023192.1 | 2 | 961 | XP_016878681.1 | |
AF108460.1 | 2 | 271 | AAF31755.1 | |
AF108461.1 | 1 | 860 | AAF31756.1 | |
AK056282.1 | 2 | 1925 | ||
AK300131.1 | 1 | 210 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv26756 | Chr.16:4772529 - 4855231 on Build GRCh38 | Gain+Loss | SEPT12 UBN1 SMIM22 GLYR1 ROGDI |
esv2422516 | Chr.16:4775920 - 5160979 on Build GRCh38 | Deletion | EEF2KMT C16orf89 SEPT12 NAGPA PPL ALG1 UBN1 SEC14L5 NAGPA-AS1 SMIM22 GLYR1 ROGDI |
nsv510674 | Chr.16:4832446 - 4882731 on Build GRCh38 | Deletion | PPL UBN1 GLYR1 |
nsv1046986 | Chr.16:4049000 - 5555721 on Build GRCh38 | Gain | ALG1 GLIS2-AS1 NAGPA-AS1 HMOX2 LOC105371063 NMRAL1 PPL C16orf71 CDIP1 C16orf96 GLIS2 VASN MGRN1 DNAJA3 GLYR1 PAM16 EEF2KMT C16orf89 UBN1 LINC01569 ADCY9 SMIM22 RBFOX1 ROGDI MIR6769A SEPT12 NAGPA ZNF500 SRL SEC14L5 UBALD1 TFAP4 CORO7-PAM16 NUDT16L1 ANKS3 CORO7 |
esv3637707 | Chr.16:4823818 - 4874308 on Build GRCh38 | Gain | UBN1 GLYR1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |