Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
AB208927.1 | BAD92164.1 | |||
AF152323.1 | AAD43717.1 |
Target Gene Details
Entrez Gene ID: | 56111 |
Gene Name: | protocadherin gamma subfamily A, 4 |
Gene Aliases: |
PCDH-GAMMA-A4 |
Location: |
Chr.5:141355025-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA4 | NM_018917.3 | NP_061740.2 | ||
AF152324.1 | AAD43718.1 |
Target Gene Details
Entrez Gene ID: | 56104 |
Gene Name: | protocadherin gamma subfamily B, 1 |
Gene Aliases: |
PCDH-GAMMA-B1 |
Location: |
Chr.5:141350261-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB1 | NM_018922.2 | NP_061745.1 | ||
AF152330.1 | AAD43724.1 |
Target Gene Details
Entrez Gene ID: | 56103 |
Gene Name: | protocadherin gamma subfamily B, 2 |
Gene Aliases: |
PCDH-GAMMA-B2 |
Location: |
Chr.5:141360136-141512979 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB2 | NM_018923.2 | NP_061746.1 | ||
NM_032096.1 | NP_115267.1 | |||
AF152331.1 | AAD43725.1 | |||
AF152518.1 | AAD43778.1 | |||
BC101805.1 | 1 | 83 | AAI01806.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | SLC25A2 PCDHGA4 PCDHGB4 PCDHB6 PCDHGB8P PCDHB16 PCDHGA8 PCDHA10 PCDHB7 PCDHGA11 PCDHB15 PCDHA5 PCDHGB6 PCDHB1 PCDHB2 PCDHGB2 PCDHA8 PCDHGA12 PCDHGA9 PCDHA11 PCDHB10 TAF7 PCDHA4 PCDHAC1 PCDHGA3 PCDHA3 PCDHB11 PCDHA12 PCDHGB3 PCDHB13 PCDHB17P PCDHAC2 PCDHB12 PCDHB3 PCDHB4 PCDHGA6 PCDHB14 PCDHA2 PCDHB9 PCDHA1 PCDHGA5 PCDHB18P PCDHA7 PCDHGA10 PCDHGB7 PCDHGA1 PCDHGB1 PCDHA6 PCDHA13 PCDHGA7 LOC101926905 PCDHA9 PCDHB19P PCDHGA2 PCDHB5 PCDHB8 PCDHGB5 |
esv3606982 | Chr.5:141352280 - 141361411 on Build GRCh38 | Loss | PCDHGA1 PCDHGA4 PCDHGB1 PCDHGA2 PCDHGB2 PCDHGA3 |
nsv599922 | Chr.5:141341879 - 141416532 on Build GRCh38 | Loss | PCDHGA4 PCDHGA8 PCDHGB3 PCDHGA5 PCDHGB6 PCDHGB4 PCDHGB2 PCDHGA10 PCDHGA1 PCDHGA9 PCDHGB1 PCDHGA7 PCDHGA6 PCDHGA2 PCDHGA3 PCDHGB5 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |