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Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:966786 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00737042_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 2 - Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 NM_001160184.1 NP_001153656.1
NM_032129.2 NP_115505.2
XM_006710944.3 XP_006711007.2
XM_011542248.2 XP_011540550.2
XM_017002474.1 XP_016857963.1
XM_017002475.1 XP_016857964.1
XM_017002476.1 XP_016857965.1
XM_017002477.1 XP_016857966.1
XM_017002478.1 XP_016857967.1
XM_017002479.1 XP_016857968.1
AL136730.1 CAB66664.1
BC101386.2 AAI01387.1
BC101387.2 AAI01388.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain LOC100130417 KLHL17 ISG15 HES4 RNF223 LOC100288175 LOC105378948 PERM1 AGRN NOC2L SAMD11 LOC284600 LOC107985728 PLEKHN1 C1orf159
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss KLHL17 TNFRSF4 MIR6723 OR4F29 LOC148413 CFAP74 LOC107985729 LOC105378948 NADK MTND2P28 ATAD3A ATAD3B CDK11A SLC35E2 CPTP LOC100129534 LOC105378949 MIR1302-2 SKI TTLL10 LOC100287934 SAMD11 MTND1P23 TAS1R3 MIR6726 MIR429 MIR200B LOC100506504 ISG15 HES4 OR4F16 SLC35E2B FAAP20 FAM87B AURKAIP1 TNFRSF18 LOC100288175 WASH7P AGRN MIR6859-2 LOC102725121 LOC729737 TTLL10-AS1 LOC100130417 LOC105378947 LINC00115 LOC100132287 SDF4 PRKCZ LOC284600 MIB2 GABRD B3GALT6 MXRA8 MRPL20 OR4F5 MIR200A PERM1 LOC107984841 MORN1 LOC105378589 TMEM88B ANKRD65 CCNL2 TMEM52 PUSL1 MIR6859-1 LINC01342 C1orf159 SSU72 DDX11L1 LOC100288069 LINC01128 MIR6808 LOC100133331 MMP23B DVL1 RNF223 VWA1 ATAD3C FNDC10 GNB1 CPSF3L CALML6 PLEKHN1 TMEM240 LOC100134822 SCNN1D ACAP3 LOC101928626 MIR6727 FAM138A MMP23A LOC105378592 LOC105378591 UBE2J2 CDK11B NOC2L LOC102724312 FAM132A LOC107985728 FAM41C
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion LOC100130417 KLHL17 ISG15 HES4 RNF223 LOC100288175 LOC105378948 PERM1 AGRN NOC2L SAMD11 LOC284600 LOC107985728 PLEKHN1 C1orf159
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion LOC100130417 PERM1 KLHL17 NOC2L SAMD11 LOC284600 LOC107985728 PLEKHN1
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain KLHL17 TNFRSF4 MIR429 MIR200B ISG15 HES4 RNF223 MIR200A TNFRSF18 LOC100288175 LOC105378948 PERM1 AGRN PLEKHN1 TTLL10-AS1 LOC100130417 SDF4 TTLL10 NOC2L LINC01342 SAMD11 LOC284600 LOC107985728 FAM41C C1orf159
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss B3GALT6 KLHL17 MXRA8 TNFRSF4 MRPL20 MIR200A LOC148413 LOC107985729 LOC105378948 PERM1 NADK ATAD3A TMEM88B ATAD3B CDK11A ANKRD65 SLC35E2 CCNL2 CPTP PUSL1 TTLL10 LOC100287934 LINC01342 SAMD11 C1orf159 SSU72 LOC100288069 LINC01128 TAS1R3 MIR6808 MIR6726 MIR429 MIR200B ISG15 HES4 MMP23B DVL1 RNF223 SLC35E2B VWA1 ATAD3C FAM87B AURKAIP1 FNDC10 TNFRSF18 LOC100288175 AGRN CPSF3L PLEKHN1 TMEM240 TTLL10-AS1 LOC100130417 SCNN1D ACAP3 MIR6727 LINC00115 MMP23A SDF4 UBE2J2 CDK11B NOC2L LOC284600 LOC102724312 FAM132A LOC107985728 FAM41C MIB2
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain LOC100288069 LINC01128 KLHL17 LOC100133331 ISG15 HES4 OR4F16 RNF223 MIR6723 FAM87B LOC100288175 LOC105378948 PERM1 AGRN MTND2P28 LOC107984841 PLEKHN1 LOC100130417 LOC101928626 LOC105378947 LINC00115 LOC100287934 NOC2L SAMD11 LOC284600 LOC107985728 MTND1P23 FAM41C C1orf159
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss LINC01128 B3GALT6 KLHL17 TNFRSF4 MIR429 MIR200B ISG15 HES4 RNF223 MIR200A FAM87B TNFRSF18 LOC100288175 LOC105378948 PERM1 AGRN PLEKHN1 TTLL10-AS1 LOC100130417 LINC00115 SDF4 UBE2J2 TTLL10 NOC2L LINC01342 SAMD11 LOC284600 FAM132A LOC107985728 FAM41C C1orf159
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain KLHL17 ISG15 HES4 RNF223 LOC100288175 LOC105378948 PERM1 AGRN NOC2L LINC01342 SAMD11 PLEKHN1 C1orf159
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion TTLL10-AS1 KLHL17 TNFRSF4 MIR429 MIR200B ISG15 HES4 RNF223 SDF4 MIR200A TNFRSF18 LOC100288175 LOC105378948 PERM1 AGRN TTLL10 NOC2L LINC01342 SAMD11 PLEKHN1 C1orf159
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss LOC100130417 PERM1 AGRN KLHL17 NOC2L SAMD11 LOC284600 ISG15 HES4 LOC107985728 PLEKHN1
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain B3GALT6 TAS1R3 MIR6808 KLHL17 MXRA8 TNFRSF4 MIR6726 MIR429 MIR200B ISG15 HES4 MRPL20 DVL1 RNF223 MIR200A LOC148413 AURKAIP1 TNFRSF18 LOC100288175 LOC105378948 PERM1 AGRN CPSF3L PLEKHN1 TMEM88B TTLL10-AS1 LOC100130417 ANKRD65 CCNL2 SCNN1D ACAP3 CPTP MIR6727 PUSL1 SDF4 UBE2J2 TTLL10 NOC2L LINC01342 SAMD11 LOC284600 FAM132A LOC107985728 C1orf159
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain LOC100130417 LINC01128 PERM1 KLHL17 NOC2L SAMD11 LOC284600 HES4 LOC107985728 FAM41C PLEKHN1

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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