Assay Details
Target Gene Details
Entrez Gene ID: | 5360 |
Gene Name: | phospholipid transfer protein |
Gene Aliases: |
BPIFE, HDLCQ9 |
Location: |
Chr.20:45898620-45912364 on Build GRCh38 |
Assay Gene Location: | Within Exon 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PLTP | NM_001242920.1 | NP_001229849.1 | ||
NM_001242921.1 | 3 | 351 | NP_001229850.1 | |
NM_006227.3 | 5 | 724 | NP_006218.1 | |
NM_182676.2 | NP_872617.1 | |||
AB076694.1 | 5 | 508 | BAB79630.1 | |
AF052157.1 | 2 | 226 | ||
AK092397.1 | 5 | 465 | ||
AK092523.1 | ||||
AK097009.1 | 4 | 1022 | ||
AK222690.1 | 5 | 512 | BAD96410.1 | |
AK289371.1 | ||||
AK293150.1 | 3 | 267 | ||
AK299181.1 | ||||
BC005045.1 | AAH05045.1 | |||
BC019847.1 | 5 | 506 | AAH19847.1 | |
BC019898.1 | 5 | 499 | AAH19898.1 | |
L26232.1 | 5 | 514 | AAA36443.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv3393 | Chr.20:45903113 - 45913226 on Build GRCh38 | Deletion | PLTP |
nsv833991 | Chr.20:45885631 - 46068708 on Build GRCh38 | Loss | ZNF335 SLC12A5 PLTP PCIF1 LOC107985388 NEURL2 CTSA MMP9 SPATA25 NCOA5 |
nsv517296 | Chr.20:45854586 - 45965936 on Build GRCh38 | Loss | ZSWIM3 ZNF335 PLTP PCIF1 LOC107985388 NEURL2 ACOT8 CTSA SPATA25 ZSWIM1 |
nsv833990 | Chr.20:45771510 - 45946844 on Build GRCh38 | Loss | ZSWIM3 LOC107985388 NEURL2 SPATA25 SNX21 PLTP PCIF1 UBE2C ACOT8 CTSA WFDC3 DNTTIP1 ZSWIM1 TNNC2 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |