Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 2 - Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | NP_001116295.1 | ||
NM_001286709.1 | NP_001273638.1 | |||
NM_012087.3 | NP_036219.2 | |||
XM_005272234.3 | XP_005272291.1 | |||
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | AAD41476.1 | |||
AJ420443.1 | ||||
AK000194.1 | BAA91001.1 | |||
AK024510.1 | ||||
AK055092.1 | ||||
AK097295.1 | BAC04993.1 | |||
AK225761.1 | ||||
AK293980.1 | ||||
AK311481.1 | ||||
AY007123.1 | AAG01991.1 | |||
BC009741.2 | AAH09741.2 | |||
BC011355.1 | AAH11355.1 | |||
BC017337.2 | AAH17337.1 | |||
BC030157.2 | AAH30157.2 | |||
BQ673969.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | REXO4 RXRA LINC00094 ADAMTS13 DBH-AS1 MIR548AW MIR3689B MIR3689D2 WDR5 DBH LOC105376306 RNU6ATAC PPP1R26 C9orf116 BRD3 LOC101448202 CACFD1 SURF1 LOC101928193 MIR4669 OLFM1 COL5A1-AS1 SNORD36C MIR3689C C9orf62 FCN2 MIR3689E MIR3689F OBP2B SURF4 LOC101928525 FAM163B SARDH CEL ADAMTSL2 LOC100130548 LOC100996574 AK8 SPACA9 COL5A1 ABO FCN1 PPP1R26-AS1 SURF6 STKLD1 MRPS2 CELP GBGT1 SLC2A6 GTF3C5 RALGDS LOC401557 SNORD24 VAV2 MIR3689A TSC1 MIR3689D1 MED22 SURF2 LCN1 TMEM8C SNORD36B SNORD141A SNORD36A RPL7A MIR6877 GFI1B |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | GTF3C5 LOC100996574 MIR6877 LOC105376306 CEL |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | GBGT1 GTF3C5 RALGDS SNORD141A LOC100996574 MIR6877 LOC105376306 GFI1B CELP CEL |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | GTF3C5 SNORD141A LOC100996574 MIR6877 LOC105376306 CEL |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |