Assay Details
Target Gene Details
Entrez Gene ID: | 57657 |
Gene Name: | hyperpolarization activated cyclic nucleotide gated potassium channel 3 |
Gene Aliases: |
- |
Location: |
Chr.1:155277427-155289848 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HCN3 | NM_020897.2 | 2 | 689 | NP_065948.1 |
NR_073074.1 | 2 | 689 | ||
XM_011509816.2 | 2 | 1207 | XP_011508118.1 | |
XM_011509817.2 | 2 | 689 | XP_011508119.1 | |
AB040968.2 | 2 | 338 | BAA96059.2 | |
AF488550.1 | 2 | 533 | AAO49470.1 | |
AK055840.1 | 2 | 417 | ||
AK299333.1 | 2 | 662 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv831636 | Chr.1:155249432 - 155475073 on Build GRCh38 | Loss | RUSC1 SCAMP3 PKLR FDPS CLK2 LOC105371451 ASH1L MIR555 POU5F1P4 FAM189B RUSC1-AS1 HCN3 |
esv33869 | Chr.1:155253492 - 155948170 on Build GRCh38 | Loss | SCARNA26A SNORA80E ARHGEF2 ASH1L YY1AP1 RIT1 MSTO1 MSTO2P RXFP4 LOC100505728 FAM189B RUSC1-AS1 SCARNA4 RUSC1 SCAMP3 PKLR FDPS CLK2 LOC105371451 POU5F1P4 SCARNA26B ASH1L-AS1 DAP3 KIAA0907 MIR555 GON4L SYT11 HCN3 |
nsv952214 | Chr.1:155279610 - 155304509 on Build GRCh38 | Deletion | PKLR HCN3 |
nsv436027 | Chr.1:155260761 - 155291532 on Build GRCh38 | Insertion | SCAMP3 PKLR CLK2 HCN3 |
esv23319 | Chr.1:155257268 - 155292883 on Build GRCh38 | Gain | SCAMP3 PKLR CLK2 HCN3 |
dgv3n68 | Chr.1:155122502 - 155343618 on Build GRCh38 | Loss | RUSC1 SCAMP3 SLC50A1 PKLR GBA FDPS CLK2 LOC105371451 ASH1L TRIM46 EFNA1 GBAP1 MTX1 DPM3 KRTCAP2 THBS3 FAM189B MIR92B RUSC1-AS1 MUC1 HCN3 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |