Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | 1 | 132 | NP_001116295.1 |
NM_001286709.1 | 1 | 132 | NP_001273638.1 | |
NM_012087.3 | 1 | 132 | NP_036219.2 | |
XM_005272234.3 | 1 | 127 | XP_005272291.1 | |
XM_011519201.1 | 1 | 114 | XP_011517503.1 | |
XM_017015315.1 | 1 | 114 | XP_016870804.1 | |
XM_017015316.1 | 1 | 114 | XP_016870805.1 | |
AF133124.1 | 1 | 87 | AAD41476.1 | |
AK055092.1 | 1 | 94 | ||
AK225761.1 | 1 | 99 | ||
AK311481.1 | 1 | 97 | ||
BC011355.1 | 1 | 76 | AAH11355.1 | |
BC017337.2 | 1 | 55 | AAH17337.1 | |
DB194811.1 | 1 | 132 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | MIR548AW MIR3689A REXO4 SNORD36B SNORD141A DBH-AS1 LOC401557 COL5A1-AS1 FAM163B TSC1 PPP1R26-AS1 OBP2B ADAMTSL2 ABO C9orf62 SNORD24 BRD3 MIR3689E SPACA9 CEL OLFM1 GBGT1 MIR3689F FCN2 GTF3C5 SURF6 SURF2 LINC00094 RXRA COL5A1 SURF1 RNU6ATAC WDR5 MIR3689D1 FCN1 LOC101928193 LOC100996574 RALGDS ADAMTS13 MED22 SNORD36A STKLD1 DBH SURF4 SNORD36C PPP1R26 AK8 MIR6877 C9orf116 TMEM8C SLC2A6 LOC101928525 CELP MRPS2 RPL7A MIR3689B LOC105376306 LOC101448202 SARDH MIR3689C CACFD1 VAV2 LCN1 MIR4669 GFI1B LOC100130548 MIR3689D2 |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | LOC100996574 MIR6877 GTF3C5 LOC105376306 CEL |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | LOC100996574 RALGDS SNORD141A MIR6877 GBGT1 CELP GFI1B GTF3C5 LOC105376306 CEL |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | LOC100996574 SNORD141A MIR6877 GTF3C5 LOC105376306 CEL |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |