Assay Details
Target Gene Details
Entrez Gene ID: | 51161 |
Gene Name: | chromosome 3 open reading frame 18 |
Gene Aliases: |
G20 |
Location: |
Chr.3:50558025-50574835 on Build GRCh38 |
Assay Gene Location: | Within Exon 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C3orf18 | NM_001171740.2 | 5 | 1214 | NP_001165211.1 |
NM_001171741.2 | 5 | 1009 | NP_001165212.1 | |
NM_001171743.2 | 5 | 993 | NP_001165214.2 | |
NM_016210.4 | 6 | 1303 | NP_057294.2 | |
XM_011533781.2 | 4 | 1953 | XP_011532083.1 | |
XM_011533782.2 | 6 | 1291 | XP_011532084.1 | |
XM_011533783.2 | 5 | 1181 | XP_011532085.1 | |
XM_011533784.2 | 6 | 1069 | XP_011532086.1 | |
XM_011533785.2 | 5 | 1007 | XP_011532087.1 | |
XM_011533788.1 | 4 | 613 | XP_011532090.1 | |
XM_011533789.1 | 3 | 638 | XP_011532091.1 | |
XM_011533790.1 | 6 | 1219 | XP_011532092.1 | |
XM_017006545.1 | 5 | 1131 | XP_016862034.1 | |
XM_017006546.1 | 4 | 458 | XP_016862035.1 | |
XM_017006547.1 | 5 | 1154 | XP_016862036.1 | |
AF188706.1 | 5 | 974 | AAF01050.1 | |
AK124438.1 | 5 | 1054 | ||
AK130227.1 | BAC85307.1 | |||
AK308074.1 | 5 | 877 | ||
AK309486.1 | 4 | 773 | ||
AK311093.1 | 2 | 494 | ||
AL833938.1 | 6 | 1262 | CAD38793.1 | |
BC034766.1 | 5 | 1087 | AAH34766.1 | |
DB027651.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3584502 | Chr.3:50327055 - 50622310 on Build GRCh38 | Gain |
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nsv460533 | Chr.3:50536782 - 50640720 on Build GRCh38 | Loss |
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nsv590272 | Chr.3:50498842 - 50578618 on Build GRCh38 | Loss |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs118103718] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)