Assay Details
Target Gene Details
Entrez Gene ID: | 115948 |
Gene Name: | coiled-coil domain containing 151 |
Gene Aliases: |
CILD30 |
Location: |
Chr.19:11420605-11435782 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CCDC151 | NM_001302453.1 | NP_001289382.1 | ||
AK302113.1 |
Target Gene Details
Entrez Gene ID: | 5589 |
Gene Name: | protein kinase C substrate 80K-H |
Gene Aliases: |
AGE-R2, G19P1, GIIB, PCLD, PKCSH, PLD1, VASAP-60 |
Location: |
Chr.19:11435257-11450968 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PRKCSH | NM_001001329.2 | 1 | 374 | NP_001001329.1 |
NM_001289103.1 | 1 | 374 | NP_001276032.1 | |
NM_001289104.1 | 1 | 374 | NP_001276033.1 | |
NM_002743.3 | NP_002734.2 | |||
XM_011528130.1 | XP_011526432.1 | |||
XM_011528131.1 | XP_011526433.1 | |||
XM_011528132.1 | XP_011526434.1 | |||
XM_017026977.1 | XP_016882466.1 | |||
AK130663.1 | ||||
AK225279.1 | ||||
AK225390.1 | ||||
AK296187.1 | ||||
BI254784.1 | 1 | 182 | ||
DB024838.1 | 1 | 80 | ||
HY029996.1 | ||||
HY051935.1 | 1 | 294 | ||
J03075.1 | AAA52493.1 | |||
Z36798.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv833752 | Chr.19:11208324 - 11448939 on Build GRCh38 | Loss | TSPAN16 RAB3D PLPPR2 RGL3 SWSAP1 HSPC102 CCDC151 PRKCSH CCDC159 ANGPTL8 DOCK6 LOC105372273 TMEM205 EPOR |
nsv519802 | Chr.19:11236817 - 11578343 on Build GRCh38 | Loss | ACP5 TSPAN16 LOC105369211 RAB3D CNN1 PLPPR2 RGL3 MIR7974 SWSAP1 HSPC102 CCDC151 PRKCSH CCDC159 ZNF653 ELOF1 ANGPTL8 ZNF627 DOCK6 TMEM205 EPOR ELAVL3 ECSIT |
More Information
Additional Information:
For this assay, SNP(s) [rs115820640] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |