Assay Details
Target Gene Details
Entrez Gene ID: | 55679 |
Gene Name: | LIM zinc finger domain containing 2 |
Gene Aliases: |
LGMD2W, PINCH-2, PINCH2 |
Location: |
Chr.2:127638421-127681786 on Build GRCh38 |
Assay Gene Location: | Within Exon 16 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LIMS2 | NM_001136037.2 | 11 | 1539 | NP_001129509.2 |
NM_001161403.1 | 10 | 1473 | NP_001154875.1 | |
NM_001161404.1 | 10 | 1763 | NP_001154876.1 | |
NM_001256542.1 | 7 | 1165 | NP_001243471.1 | |
NM_017980.4 | 10 | 1584 | NP_060450.2 | |
XM_005263710.2 | 9 | 1256 | XP_005263767.1 | |
XM_006712627.3 | 7 | 1065 | XP_006712690.1 | |
XM_011511453.1 | 9 | 1320 | XP_011509755.1 | |
XM_017004469.1 | 5 | 1030 | XP_016859958.1 | |
AF520987.1 | 10 | 1928 | AAM77350.1 | |
AF527764.1 | 10 | 1538 | AAQ09011.1 | |
AF527765.1 | 10 | 1400 | AAQ09012.1 | |
AF527766.1 | 10 | 1440 | AAQ09013.1 | |
AF527767.1 | 9 | 1696 | AAQ09014.1 | |
AF527768.1 | 8 | 1055 | AAQ09015.1 | |
AF527769.1 | 6 | 1129 | AAQ09016.1 | |
AF527770.1 | 7 | 1092 | AAQ09017.1 | |
AK000906.1 | 8 | 955 | BAA91419.1 | |
AK022470.1 | 10 | 1352 | BAB14047.1 | |
AK055363.1 | 10 | 1928 | ||
AK091652.1 | 8 | 1834 | ||
AK093692.1 | 4 | 1527 | ||
AK094954.1 | 9 | 2020 | ||
AK095790.1 | 13 | 1988 | ||
AK123014.1 | 5 | 4232 | ||
AK297645.1 | ||||
AL512716.1 | 1 | 412 | CAC21657.1 | |
BC001370.2 | 2 | 563 | AAH01370.1 | |
BC008977.1 | 2 | 478 | ||
BC065816.1 | 10 | 1391 | AAH65816.1 | |
CA439343.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv517532 | Chr.2:127630362 - 127647285 on Build GRCh38 | Loss | LIMS2 GPR17 MYO7B |
dgv4069n100 | Chr.2:127537744 - 127722066 on Build GRCh38 | Gain | SFT2D3 LIMS2 GPR17 WDR33 LOC105373609 MYO7B |
esv3893304 | Chr.2:127634972 - 127643416 on Build GRCh38 | Loss | LIMS2 MYO7B |
nsv508864 | Chr.2:127585891 - 127684658 on Build GRCh38 | Insertion | LIMS2 GPR17 MYO7B |
nsv953155 | Chr.2:127617926 - 127665326 on Build GRCh38 | Deletion | LIMS2 GPR17 MYO7B |
nsv518085 | Chr.2:127576838 - 127647285 on Build GRCh38 | Loss | LIMS2 GPR17 MYO7B |
nsv470482 | Chr.2:127593233 - 127707973 on Build GRCh38 | Loss | SFT2D3 LIMS2 GPR17 WDR33 MYO7B |
nsv583037 | Chr.2:127576895 - 127643516 on Build GRCh38 | Loss | LIMS2 MYO7B |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |