Assay Details
Target Gene Details
Entrez Gene ID: | 79680 |
Gene Name: | chromosome 22 open reading frame 29 |
Gene Aliases: |
BOP |
Location: |
Chr.22:19846138-19854848 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C22orf29 | NM_024627.5 | 3 | 4115 | NP_078903.3 |
AK026924.1 | 1 | 62 | ||
BX640785.1 | 2 | 4204 | CAE45875.1 | |
BX640969.1 | 3 | 4084 | CAE45984.1 | |
BX640998.1 | 3 | 4084 | CAE46001.1 |
Target Gene Details
Entrez Gene ID: | 54584 |
Gene Name: | G protein subunit beta 1 like |
Gene Aliases: |
DGCRK3, FKSG1, GY2, WDR14, WDVCF |
Location: |
Chr.22:19788411-19854939 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GNB1L | NM_053004.2 | NP_443730.1 | ||
AB051432.1 | ||||
AF238328.1 | AAG36826.1 | |||
AF301895.1 | AAG53933.1 | |||
AY007378.1 | AAG12162.1 | |||
BC012060.1 | AAH12060.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834129 | Chr.22:19705617 - 19919068 on Build GRCh38 | Loss | TBX1 SEPT5 GP1BB C22orf29 TXNRD2 SEPT5-GP1BB GNB1L |
nsv953024 | Chr.22:19842078 - 19854877 on Build GRCh38 | Deletion | C22orf29 GNB1L |
esv3893434 | Chr.22:19470889 - 20343372 on Build GRCh38 | Gain | SEPT5 MIR1306 GNB1L GP1BB MIR6816 RTN4R MIR3618 LOC440792 DGCR8 LINC00896 TXNRD2 UFD1L LINC00895 ARVCF SEPT5-GP1BB ZDHHC8 LOC284865 CDC45 MIR185 TBX1 LOC101927859 RANBP1 CCDC188 TRMT2A C22orf29 MIR4761 MIR1286 DGCR6L COMT TANGO2 CLDN5 |
nsv828939 | Chr.22:19696032 - 20324465 on Build GRCh38 | Loss | SEPT5 MIR1306 GNB1L GP1BB MIR6816 RTN4R MIR3618 LOC440792 DGCR8 LINC00896 TXNRD2 ARVCF SEPT5-GP1BB ZDHHC8 LOC284865 MIR185 TBX1 RANBP1 CCDC188 TRMT2A C22orf29 MIR4761 MIR1286 DGCR6L COMT TANGO2 |
nsv828938 | Chr.22:19691069 - 20324465 on Build GRCh38 | Gain | SEPT5 MIR1306 GNB1L GP1BB MIR6816 RTN4R MIR3618 LOC440792 DGCR8 LINC00896 TXNRD2 ARVCF SEPT5-GP1BB ZDHHC8 LOC284865 MIR185 TBX1 RANBP1 CCDC188 TRMT2A C22orf29 MIR4761 MIR1286 DGCR6L COMT TANGO2 |
nsv834130 | Chr.22:19837923 - 19940567 on Build GRCh38 | Loss | C22orf29 TXNRD2 GNB1L |
esv3568260 | Chr.22:19777375 - 19881883 on Build GRCh38 | Loss | TBX1 C22orf29 TXNRD2 GNB1L |
esv3647279 | Chr.22:19719848 - 19878980 on Build GRCh38 | Gain | TBX1 SEPT5 GP1BB C22orf29 TXNRD2 SEPT5-GP1BB GNB1L |
dgv7983n54 | Chr.22:19762002 - 20321870 on Build GRCh38 | Gain | DGCR8 LINC00896 TXNRD2 ARVCF MIR1306 GNB1L ZDHHC8 LOC284865 MIR185 TBX1 RANBP1 CCDC188 TRMT2A C22orf29 MIR4761 MIR1286 MIR6816 RTN4R DGCR6L MIR3618 COMT TANGO2 LOC440792 |
esv3575418 | Chr.22:18161776 - 19963846 on Build GRCh38 | Gain | TSSK2 SEPT5 DGCR5 SLC25A1 GSC2 LOC729461 GNB1L HIRA PRODH GP1BB DGCR6 DGCR14 LOC642643 CLTCL1 DGCR2 LOC100996415 LINC01311 DGCR9 USP18 TXNRD2 UFD1L TMEM191B FAM230A LINC00895 LOC100996401 PI4KAP1 SEPT5-GP1BB CDC45 GGT3P TBX1 C22orf29 MIR4761 RIMBP3 MRPL40 DGCR10 LOC102725072 DGCR11 COMT CLDN5 LOC100996432 C22orf39 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |