Assay Details
Target Gene Details
Entrez Gene ID: | 338707 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 4 |
Gene Aliases: |
- |
Location: |
Chr.11:369773-382117 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 10 - Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT4 | NM_178537.4 | NP_848632.2 | ||
XM_017017654.1 | XP_016873143.1 | |||
AB089939.1 | BAD06471.1 | |||
BC131528.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | IFITM1 SIGIRR PHRF1 RNH1 CDHR5 LMNTD2 B4GALNT4 PTDSS2 PGGHG IFITM5 LOC101059906 ANO9 IFITM2 HRAS PKP3 IFITM3 IRF7 MIR210HG LOC143666 MIR210 LRRC56 RASSF7 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | SIGIRR PKP3 B4GALNT4 ANO9 |
nsv1118197 | Chr.11:374500 - 377100 on Build GRCh38 | Deletion | B4GALNT4 |
esv28392 | Chr.11:363975 - 403432 on Build GRCh38 | Gain+Loss | PKP3 B4GALNT4 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | SIGIRR RNH1 PKP3 B4GALNT4 PTDSS2 ANO9 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | SIGIRR PKP3 B4GALNT4 ANO9 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | IFITM1 PSMD13 SIGIRR SIRT3 B4GALNT4 ODF3 PTDSS2 PGGHG IFITM5 RIC8A ANO9 NLRP6 BET1L IFITM2 MIR6743 PKP3 IFITM3 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | SIGIRR PKP3 B4GALNT4 PTDSS2 ANO9 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | PIDD1 RNH1 POLR2L SNORA52 LOC171391 CEND1 B4GALNT4 PTDSS2 ANO9 DRD4 DEAF1 TMEM80 HRAS MIR210HG TALDO1 RPLP2 LOC143666 MIR210 CRACR2B RASSF7 CD151 PANO1 TSPAN4 CHID1 SIGIRR PHRF1 PNPLA2 CDHR5 LMNTD2 SLC25A22 LOC101059906 SCT PDDC1 PKP3 EPS8L2 IRF7 AP2A2 LRRC56 |
dgv1507n54 | Chr.11:368778 - 382912 on Build GRCh38 | Loss | B4GALNT4 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |