Assay Details
Target Gene Details
Entrez Gene ID: | 54108 |
Gene Name: | chromatin accessibility complex 1 |
Gene Aliases: |
CHARC1, CHARC15, CHRAC-1, CHRAC-15, CHRAC15, YCL1 |
Location: |
Chr.8:140511298-140517153 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 3 - Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CHRAC1 | NM_017444.5 | NP_059140.1 | ||
NR_023360.2 | ||||
NR_040712.1 | ||||
AF226076.1 | AAF72416.1 | |||
AK023537.1 | BAB14601.1 | |||
AK308709.1 | ||||
AK311595.1 | 2 | 204 | ||
AL543044.3 | ||||
BC015891.1 | AAH15891.1 | |||
BU160855.1 | ||||
DA647606.1 | ||||
DA887467.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2737756 | Chr.8:140419230 - 141917755 on Build GRCh38 | Deletion | LOC105375787 GPR20 AGO2 LOC107986982 MIR1302-7 PTP4A3 MROH5 TRAPPC9 MIR151A FP248 LINC01300 PTK2 SLC45A4 CHRAC1 DENND3 |
nsv1016282 | Chr.8:140453461 - 140537127 on Build GRCh38 | Gain | TRAPPC9 AGO2 CHRAC1 |
nsv509283 | Chr.8:140435015 - 140522401 on Build GRCh38 | Insertion | TRAPPC9 AGO2 CHRAC1 |
nsv1126125 | Chr.8:140419236 - 141917668 on Build GRCh38 | Deletion | LOC105375787 GPR20 AGO2 LOC107986982 MIR1302-7 PTP4A3 MROH5 TRAPPC9 MIR151A FP248 LINC01300 PTK2 SLC45A4 CHRAC1 DENND3 |
nsv612566 | Chr.8:140448395 - 140519958 on Build GRCh38 | Loss | TRAPPC9 CHRAC1 |
dgv12367n54 | Chr.8:140431882 - 140524741 on Build GRCh38 | Gain | TRAPPC9 AGO2 CHRAC1 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |