Assay Details
Target Gene Details
Entrez Gene ID: | 9810 |
Gene Name: | ring finger protein 40 |
Gene Aliases: |
BRE1B, RBP95, STARING |
Location: |
Chr.16:30761612-30800231 on Build GRCh38 |
Assay Gene Location: | Within Exon 15 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RNF40 | NM_001207033.1 | 15 | 2965 | NP_001193962.1 |
NM_001207034.1 | 13 | 2665 | NP_001193963.1 | |
NM_001286572.2 | 15 | 2326 | NP_001273501.1 | |
NM_014771.3 | 15 | 2965 | NP_055586.1 | |
XM_011545997.1 | 15 | 2306 | XP_011544299.1 | |
AB014561.1 | 15 | 2237 | ||
AF122819.1 | 15 | 2241 | AAG13723.1 | |
AK027406.1 | 13 | 1955 | BAB55092.1 | |
AK075526.1 | ||||
AK131310.1 | 5 | 480 | BAD18476.1 | |
AK291666.1 | 15 | 2255 | ||
AK293710.1 | 5 | 468 | ||
AK294258.1 | 5 | 550 | ||
AK297531.1 | 9 | 1371 | ||
AK304521.1 | ||||
BC006133.1 | 15 | 2232 | AAH06133.1 | |
BC011769.2 | 15 | 2232 | AAH11769.1 | |
BC018647.2 | 15 | 2232 | AAH18647.1 | |
BC030802.1 | 7 | 1126 | AAH30802.2 | |
BX640763.1 | 12 | 1599 | CAE45869.1 | |
CR627431.1 | 15 | 2294 | CAH10518.1 | |
KU178492.1 | 14 | 2145 | ||
KU178493.1 | 14 | 2145 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv469724 | Chr.16:30621124 - 30828942 on Build GRCh38 | Loss | SNORA30 FBRS LOC730183 PRR14 SRCAP TMEM265 PHKG2 ZNF629 CCDC189 RNF40 |
nsv9438 | Chr.16:30758882 - 30788121 on Build GRCh38 | Gain | PHKG2 ZNF629 CCDC189 RNF40 |
nsv833188 | Chr.16:30621125 - 30828942 on Build GRCh38 | Loss | SNORA30 FBRS LOC730183 PRR14 SRCAP TMEM265 PHKG2 ZNF629 CCDC189 RNF40 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |