Assay Details
Target Gene Details
Entrez Gene ID: | 92745 |
Gene Name: | solute carrier family 38 member 5 |
Gene Aliases: |
JM24, SN2, SNAT5, pp7194 |
Location: |
Chr.X:48458537-48470256 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 19 - Exon 19 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC38A5 | NM_033518.3 | NP_277053.2 | ||
XM_005272694.3 | XP_005272751.2 | |||
XM_005272695.4 | XP_005272752.3 | |||
XM_005272697.2 | XP_005272754.2 | |||
XM_005272698.4 | XP_005272755.2 | |||
XM_006724569.3 | XP_006724632.1 | |||
XM_017029960.1 | XP_016885449.1 | |||
XM_017029961.1 | XP_016885450.1 | |||
AF276889.1 | AAK61856.1 | |||
AF318358.1 | AAL55865.1 | |||
AK094788.1 | ||||
BC019246.2 | AAH19246.1 | |||
BC027721.2 | AAH27721.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv528292 | Chr.X:48433286 - 49274368 on Build GRCh38 | Gain | PPP1R3F PQBP1 CACNA1F CCDC22 FTSJ1 WDR13 GPKOW LOC101927635 CCDC120 SUV39H1 PORCN GRIPAP1 PRICKLE3 GLOD5 EBP WAS PIM2 PRAF2 ERAS TBC1D25 PCSK1N WDR45 RBM3 SYP-AS1 SLC38A5 GATA1 MAGIX SYP HDAC6 TIMM17B TFE3 KCND1 OTUD5 FOXP3 PLP2 SLC35A2 |
esv32909 | Chr.X:48003374 - 49285646 on Build GRCh38 | Gain+Loss | PPP1R3F SPACA5 PQBP1 CACNA1F CCDC22 FTSJ1 ZNF182 WDR13 GPKOW LOC101927635 CCDC120 SUV39H1 PORCN GRIPAP1 ZNF630 PRICKLE3 GLOD5 EBP SSX4 WAS SSX9 PIM2 PRAF2 SSX4B ERAS SPACA5B TBC1D25 SSX3 SSX1 PCSK1N WDR45 RBM3 ZNF630-AS1 SYP-AS1 SSX6 SLC38A5 GATA1 MAGIX SYP HDAC6 SSX5 TIMM17B TFE3 KCND1 OTUD5 FOXP3 PLP2 SLC35A2 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |