Assay Details
Target Gene Details
Entrez Gene ID: | 5786 |
Gene Name: | protein tyrosine phosphatase, receptor type A |
Gene Aliases: |
HEPTP, HLPR, HPTPA, HPTPalpha, LRP, PTPA, PTPRL2, R-PTP-alpha, RPTPA |
Location: |
Chr.20:2864195-3038669 on Build GRCh38 |
Assay Gene Location: | Within Intron 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PTPRA | NM_002836.3 | NP_002827.1 | ||
M34668.1 | AAA36528.1 |
Target Gene Details
Entrez Gene ID: | 64601 |
Gene Name: | VPS16, CORVET/HOPS core subunit |
Gene Aliases: |
hVPS16 |
Location: |
Chr.20:2840697-2866732 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 23 - Intron 23 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
VPS16 | NM_022575.3 | NP_072097.2 | ||
NM_080413.2 | NP_536338.1 | |||
AF308801.1 | AAG34678.1 | |||
AK055787.1 | BAB71013.1 | |||
AL834401.1 | CAD39063.1 | |||
BC012422.1 | AAH12422.1 | |||
BC021291.2 | AAH21291.2 | |||
BC064406.1 | AAH64406.1 | |||
BC073959.1 | AAH73959.1 | |||
BC126431.1 | ||||
BM468030.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3645020 | Chr.20:2816405 - 2926274 on Build GRCh38 | Gain |
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nsv1057464 | Chr.20:2650623 - 2989686 on Build GRCh38 | Gain |
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nsv522009 | Chr.20:2745032 - 3030542 on Build GRCh38 | Gain |
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nsv833895 | Chr.20:2730164 - 2882236 on Build GRCh38 | Loss |
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esv2762056 | Chr.20:2740745 - 2944353 on Build GRCh38 | Gain |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)