Assay Details
Target Gene Details
Entrez Gene ID: | 8924 |
Gene Name: | HECT and RLD domain containing E3 ubiquitin protein ligase 2 |
Gene Aliases: |
D15F37S1, MRT38, SHEP1, jdf2, p528 |
Location: |
Chr.15:28111037-28322173 on Build GRCh38 |
Assay Gene Location: | Within Exon 95 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HERC2 | NM_004667.5 | 90 | 13970 | NP_004658.3 |
XM_005268276.4 | 89 | 14100 | XP_005268333.1 | |
XM_006720726.3 | 90 | 13976 | XP_006720789.1 | |
XM_006720727.3 | 88 | 13733 | XP_006720790.1 | |
XM_011522131.2 | 88 | 13757 | XP_011520433.1 | |
XM_011522133.2 | 71 | 10736 | XP_011520435.1 | |
XM_017022695.1 | 89 | 13917 | XP_016878184.1 | |
XM_017022696.1 | 89 | 13860 | XP_016878185.1 | |
XM_017022697.1 | 49 | 7299 | XP_016878186.1 | |
XM_017022698.1 | 49 | 7210 | XP_016878187.1 | |
AF071172.3 | 90 | 13922 | AAD08657.1 | |
AL834183.1 | 4 | 986 | CAD38880.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3635988 | Chr.15:28098445 - 28194723 on Build GRCh38 | Gain | OCA2 HERC2 |
dgv2489n100 | Chr.15:27807877 - 28121044 on Build GRCh38 | Gain | OCA2 HERC2 |
nsv952579 | Chr.15:28094855 - 28118154 on Build GRCh38 | Deletion | OCA2 HERC2 |
nsv428299 | Chr.15:28042424 - 28817373 on Build GRCh38 | Loss | OCA2 LOC100132202 MIR4509-2 GOLGA8G GOLGA8F MIR4509-3 LOC100289656 LOC101929047 LOC645202 WHAMMP2 HERC2 GOLGA8M HERC2P11 PDCD6IPP2 HERC2P9 |
nsv568663 | Chr.15:27783102 - 28176880 on Build GRCh38 | Loss | OCA2 HERC2 |
nsv1039684 | Chr.15:28080438 - 28315658 on Build GRCh38 | Gain | OCA2 HERC2 |
esv3635990 | Chr.15:28108015 - 28121432 on Build GRCh38 | Gain | HERC2 |
nsv1052131 | Chr.15:27932591 - 28460005 on Build GRCh38 | Gain | OCA2 HERC2 MIR4509-2 GOLGA8F LOC645202 |
nsv1038472 | Chr.15:27647423 - 28256473 on Build GRCh38 | Gain | OCA2 HERC2 |
nsv568662 | Chr.15:27726493 - 29056123 on Build GRCh38 | Gain | OCA2 LOC100132202 MIR4509-2 GOLGA8G GOLGA8F MIR4509-3 LOC100289656 GOLGA6L7P LOC101929047 LOC645202 APBA2 WHAMMP2 HERC2 GOLGA8M LOC107984752 HERC2P11 PDCD6IPP2 HERC2P9 |
nsv1047941 | Chr.15:28110984 - 28168961 on Build GRCh38 | Gain | HERC2 |
nsv568665 | Chr.15:28065828 - 28123823 on Build GRCh38 | Loss | OCA2 HERC2 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |