Hs00447999_cn

• Gene Symbol: HNRNPAB
• Assay Reference Genome Location: Chr.5:178208614 on build GRCh38
• Cytoband: 5q35.3

Target Gene Details

• Entrez Gene ID: 3182
• Gene Name: heterogeneous nuclear ribonucleoprotein A/B
• Gene Aliases: ABBP1, HNRPAB
• Location: Chr.5:178204507-178211183 on Build GRCh38
• Assay Gene Location: Within Intron 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HNRNPAB	NM_004499.3			NP_004490.2
	NM_031266.2			NP_112556.2
	AK054600.1
	AK097657.1			BAC05134.1
	AK223425.1			BAD97145.1
	BC001616.1			AAH01616.1
	BC002625.2			AAH02625.1
	BC004561.2			AAH04561.1
	BC009359.2			AAH09359.1
	BC036708.2			AAH36708.1
	M65028.1			AAA36575.1
	U76713.1			AAC50956.1
	Z36844.1

Target Gene Details

• Entrez Gene ID: 85007
• Gene Name: 5-phosphohydroxy-L-lysine phospho-lyase
• Gene Aliases: AGXT2L2, PHLU
• Location: Chr.5:178208474-178232822 on Build GRCh38
• Assay Gene Location: Within Exon 13

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PHYKPL	NM_001278346.1	13	2781	NP_001265275.1
	NM_153373.3	13	1958	NP_699204.1
	NR_103508.1	10	1544
	NR_103509.1	10	2376
	NR_103510.1	14	2048
	XM_006714925.2			XP_006714988.1
	XM_011534669.2			XP_011532971.1
	XM_011534670.2			XP_011532972.1
	XM_011534671.2			XP_011532973.1
	XM_011534672.2			XP_011532974.1
	XM_011534674.2			XP_011532976.1
	XM_011534676.2			XP_011532978.1
	XM_017009996.1	12	1819	XP_016865485.1
	XM_017009997.1	12	1789	XP_016865486.1
	XM_017009998.1			XP_016865487.1
	XM_017009999.1			XP_016865488.1
	AA862441.1	1	80
	AF318375.1			AAL55882.1
	AK023470.1	10	1910
	AK292061.1
	BC008009.1			AAH08009.1
	BC037567.1			AAH37567.1
	HY267487.1	1	143

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1019404	Chr.5:178080079 - 178432088 on Build GRCh38	Gain	GMCL1P1 RMND5B NHP2 COL23A1 HNRNPAB PHYKPL N4BP3

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

epithelial to mesenchymal transition
positive regulation of transcription, DNA-templated
lysine catabolic process
collagen catabolic process

Function(s)

nucleotide binding
transcription factor activity, sequence-specific DNA binding
RNA binding
mRNA binding
protein binding
sequence-specific DNA binding
poly(A) RNA binding
transaminase activity
lyase activity
pyridoxal phosphate binding
identical protein binding