Assay Details
Target Gene Details
Entrez Gene ID: | 64223 |
Gene Name: | MTOR associated protein, LST8 homolog |
Gene Aliases: |
GBL, GbetaL, LST8, POP3, WAT1 |
Location: |
Chr.16:2205177-2209417 on Build GRCh38 |
Assay Gene Location: | Within Exon 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MLST8 | NM_001199173.1 | 8 | 1138 | NP_001186102.1 |
NM_001199174.1 | 8 | 977 | NP_001186103.1 | |
NM_001199175.1 | 8 | 1165 | NP_001186104.1 | |
NM_022372.4 | 8 | 1168 | NP_071767.3 | |
XM_005255475.3 | 8 | 944 | XP_005255532.2 | |
XM_005255478.2 | 8 | 1149 | XP_005255535.1 | |
XM_005255479.2 | 8 | 1076 | XP_005255536.1 | |
XM_017023548.1 | 8 | 1133 | XP_016879037.1 | |
XM_017023549.1 | 8 | 874 | XP_016879038.1 | |
XM_017023551.1 | 8 | 1183 | XP_016879040.1 | |
AF195883.1 | 5 | 489 | AAF04308.1 | |
AK021536.1 | 8 | 1137 | ||
AK022227.1 | 7 | 822 | BAB13990.1 | |
AK098762.1 | 8 | 1073 | ||
AK123195.1 | 1 | 943 | ||
AK302201.1 | 7 | 977 | ||
AY223837.1 | 7 | 978 | AAO73410.1 | |
BC001313.2 | 8 | 858 | AAH01313.1 | |
BC017119.1 | 7 | 869 | AAH17119.1 | |
BC052292.1 | 7 | 1392 | AAH52292.1 | |
BC088354.1 | 8 | 886 | AAH88354.1 | |
BI761765.1 | 8 | 895 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | ABCA17P WFIKKN1 ERVK13-1 IFT140 NOXO1 LOC105371046 PRSS27 TPSB2 LOC100287175 METRN PDIA2 HBA2 FLJ42627 RHBDF1 WDR90 POLR3K KCTD5 GNPTG TMEM204 C16orf91 HS3ST6 SNORA64 NPRL3 CLCN7 DECR2 MLST8 JMJD8 FAHD1 WDR24 LOC729652 DDX11L10 FAM173A ABCA3 UNKL HBQ1 PTX4 LOC652276 LINC00254 RHBDL1 LOC105371049 ECI1 HBM MIR6768 C16orf59 TMEM8A PRSS29P RHOT2 CCDC154 MSRB1 TSC2 HBZ MIR4717 CCNF MIR940 LOC100134368 MIR5587 ATP6V0C AXIN1 TELO2 TRAF7 LOC105371038 HAGHL MSLN MRPS34 LOC105371047 MIR6511B1 MIR3180-5 WASIR2 CASKIN1 CACNA1H HBA1 EME2 GNG13 SSTR5-AS1 RAB26 RAB11FIP3 SLC9A3R2 GFER MAPK8IP3 IGFALS LOC105371184 SNORA10 TPSG1 CEMP1 MIR1225 MCRIP2 TBL3 E4F1 CCDC78 TPSAB1 MEIOB TBC1D24 RAB40C METTL26 CRAMP1 SOX8 ARHGDIG NTHL1 FBXL16 NPW RNPS1 MIR6767 LOC106660606 LINC00235 MPG CHTF18 RGS11 LOC101929280 CAPN15 TSR3 FAM234A NME3 MIR3677 NTN3 SNHG19 DNASE1L2 NHLRC4 RPS2 NARFL SPSB3 ZNF598 RPL3L NUBP2 LUC7L MRPL28 RNF151 RPL23AP5 SNORA78 MIR6859-4 PRR25 RPUSD1 SYNGR3 C1QTNF8 LMF1 HAGH AMDHD2 LOC107984876 PRR35 BAIAP3 LMF1-AS1 SNHG9 STUB1 NDUFB10 LOC107987233 PDPK1 SNORD60 BRICD5 MIR662 PKD1 MIR3176 MIR3178 LOC105371045 UBE2I SSTR5 PGP NME4 HN1L TPSD1 PIGQ MIR4516 MIR3177 SNRNP25 |
nsv471072 | Chr.16:1971892 - 2317508 on Build GRCh38 | Loss | MIR1225 TBL3 E4F1 SYNGR3 NOXO1 TSC2 MIR4717 MIR940 NTHL1 NPW SNORD60 RNPS1 TRAF7 LOC106660606 BRICD5 PKD1 MIR6511B1 MIR3180-5 CASKIN1 MIR3677 PGP SNHG19 DNASE1L2 MLST8 RAB26 SLC9A3R2 GFER MIR4516 ZNF598 ABCA3 LOC105371049 ECI1 |
dgv4861n54 | Chr.16:2083900 - 2246850 on Build GRCh38 | Loss | BRICD5 PKD1 MIR1225 MIR6511B1 MIR3180-5 E4F1 CASKIN1 PGP SNHG19 DNASE1L2 MLST8 TSC2 RAB26 MIR4516 SNORD60 TRAF7 LOC105371049 ECI1 |
dgv4863n54 | Chr.16:2141733 - 2274302 on Build GRCh38 | Loss | BRICD5 E4F1 CASKIN1 MIR3677 PGP SNHG19 DNASE1L2 MLST8 MIR940 RAB26 SNORD60 RNPS1 TRAF7 LOC106660606 ECI1 |
nsv1711 | Chr.16:2199093 - 2232650 on Build GRCh38 | Insertion | BRICD5 E4F1 PGP MLST8 |
nsv457351 | Chr.16:2156590 - 2274302 on Build GRCh38 | Loss | BRICD5 MIR940 E4F1 CASKIN1 MIR3677 PGP RNPS1 DNASE1L2 MLST8 TRAF7 LOC106660606 ECI1 |
nsv1052260 | Chr.16:2074546 - 2629655 on Build GRCh38 | Gain | ABCA17P CEMP1 MIR6768 MIR1225 C16orf59 E4F1 TBC1D24 AMDHD2 TSC2 MIR4717 CCNF MIR940 PDPK1 SNORD60 RNPS1 ATP6V0C MIR6767 TRAF7 LOC106660606 BRICD5 PKD1 MIR6511B1 MIR3180-5 MIR3178 CASKIN1 MIR3677 PGP NTN3 SNHG19 DNASE1L2 MLST8 LOC729652 RAB26 MIR4516 ABCA3 LOC652276 LOC105371049 ECI1 |
nsv952902 | Chr.16:2143400 - 2339999 on Build GRCh38 | Deletion | BRICD5 E4F1 CASKIN1 MIR3677 PGP SNHG19 DNASE1L2 MLST8 MIR4717 MIR940 RAB26 ABCA3 SNORD60 RNPS1 TRAF7 LOC106660606 ECI1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |