Assay Details
Target Gene Details
Entrez Gene ID: | 51294 |
Gene Name: | protocadherin 12 |
Gene Aliases: |
VE-cadherin-2, VECAD2 |
Location: |
Chr.5:141943585-141959062 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDH12 | NM_016580.3 | 1 | 3062 | NP_057664.1 |
AB026893.1 | 1 | 1908 | BAA95162.1 | |
AF231025.1 | 1 | 2157 | AAF61931.1 | |
AF240635.1 | 1 | 3062 | AAF73962.1 | |
AK023785.1 | 1 | 725 | BAB14677.1 | |
AK024140.1 | 1 | 2200 | BAB14837.1 | |
AK027282.1 | BAB55016.1 | |||
AK226049.1 | 1 | 2159 | ||
AK315029.1 | 1 | 2159 | ||
AY358428.1 | 1 | 2179 | AAQ88794.1 | |
BC042634.1 | 1 | 2112 | AAH42634.1 | |
BC052973.1 | 1 | 2169 | AAH52973.1 |
Target Gene Details
Entrez Gene ID: | 9604 |
Gene Name: | ring finger protein 14 |
Gene Aliases: |
ARA54, HFB30, HRIHFB2038, TRIAD2 |
Location: |
Chr.5:141949337-141993709 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RNF14 | XM_017010070.1 | XP_016865559.1 | ||
XM_017010076.1 | XP_016865565.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1154058 | Chr.5:141632251 - 142199943 on Build GRCh38 | Deletion | ARAP3 FCHSD1 KIAA0141 GNPDA1 RNF14 LOC729080 PCDH12 RELL2 PCDH1 HDAC3 NDFIP1 |
nsv526702 | Chr.5:141955356 - 141960198 on Build GRCh38 | Loss | RNF14 PCDH12 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |