Assay Details
Target Gene Details
Entrez Gene ID: | 57333 |
Gene Name: | reticulocalbin 3 |
Gene Aliases: |
RLP49 |
Location: |
Chr.19:49527579-49543638 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RCN3 | NM_020650.2 | 2 | 590 | NP_065701.2 |
XM_005259089.3 | 3 | 779 | XP_005259146.1 | |
XM_011527143.1 | 3 | 779 | XP_011525445.1 | |
XM_017027023.1 | 2 | 864 | XP_016882512.1 | |
AF183423.1 | 1 | 175 | AAG09692.1 | |
AY195859.1 | 2 | 590 | AAO43054.1 | |
AY358423.1 | 2 | 177 | AAQ88789.1 | |
BC013436.1 | 2 | 173 | AAH13436.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss | SYNGR4 TULP2 ZNF114 TBC1D17 IL4I1 DKKL1 PTOV1 ELSPBP1 RUVBL2 SEC1P CGB1 KDELR1 CGB3 SNAR-A10 NTN5 TEAD2 LOC100287477 RPL13A FCGRT LIG1 DHDH NTF4 SNAR-A7 SNAR-A12 PRRG2 EMP3 SIGLEC16 LOC105372430 CYTH2 LHB TSKS CD37 ZNF473 RASIP1 DBP MIR4751 SPHK2 FLT3LG MIR4749 SNAR-A5 RPL18 ADM5 KCNJ14 GYS1 TRPM4 ALDH16A1 BSPH1 PTOV1-AS1 SNAR-A2 LOC105447645 MIR6800 NOSIP CCDC155 SLC6A16 FLJ26850 RRAS PTOV1-AS2 RPS11 SNORD32A SIGLEC11 SNAR-C4 GRWD1 PPP1R15A FAM83E MIR4324 NUP62 CGB8 SNORD33 LOC101059948 C19orf68 CARD8-AS1 CA11 BCL2L12 SNAR-C1 PIH1D1 NUCB1 VRK3 SNAR-A3 SNORD35B SNAR-A6 SNAR-G1 BCAT2 SLC17A7 CGB2 SNORD35A KCNA7 FGF21 GRIN2D AKT1S1 RCN3 SNAR-G2 IRF3 PTH2 SNAR-A4 SNRNP70 SNAR-B2 CGB7 LMTK3 SNAR-C3 CPT1C MED25 C19orf73 CARD8 BAX FUT1 AP2A1 PRMT1 CCDC114 SNORD34 MAMSTR MIR6799 GFY MIR4750 SNAR-C5 SNAR-A9 MIR5088 SNAR-A8 SNAR-A14 SNAR-A13 FUZ PRR12 SNAR-D CGB5 MIR150 SNAR-B1 MIR6798 SNAR-C2 SNAR-A1 SCAF1 PNKP PLA2G4C-AS1 CABP5 NUCB1-AS1 FTL IZUMO1 HRC FUT2 SNAR-A11 LIN7B PLA2G4C SULT2B1 HSD17B14 PPFIA3 ATF5 LOC101928295 SPACA4 PLEKHA4 TMEM143 |
nsv833863 | Chr.19:49479177 - 49629716 on Build GRCh38 | Loss | SNORD33 MIR150 RPL13A FLT3LG NOSIP SNORD35A FCGRT SNORD34 RCN3 PRRG2 RPS11 SNORD32A SNORD35B PRR12 |
nsv833862 | Chr.19:49448789 - 49570676 on Build GRCh38 | Loss | SNORD33 MIR150 RPL13A FLT3LG NOSIP SNORD35A FCGRT SNORD34 RCN3 RPS11 PIH1D1 SNORD32A SNORD35B ALDH16A1 |
nsv1160655 | Chr.19:49489110 - 49841830 on Build GRCh38 | Deletion | CPT1C MED25 SNORD33 AP2A1 ADM5 PRMT1 SNORD34 MIR6799 BCL2L12 MIR5088 SNORD35B FUZ PRR12 PTOV1-AS1 MIR6800 MIR150 RPL13A NOSIP SNORD35A FCGRT RRAS SCAF1 RCN3 PRRG2 RPS11 IRF3 TSKS SNORD32A |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |