Assay Details
Target Gene Details
Entrez Gene ID: | 57657 |
Gene Name: | hyperpolarization activated cyclic nucleotide gated potassium channel 3 |
Gene Aliases: |
- |
Location: |
Chr.1:155277427-155289848 on Build GRCh38 |
Assay Gene Location: | Within Exon 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HCN3 | NM_020897.2 | 8 | 2629 | NP_065948.1 |
NR_073074.1 | 8 | 2496 | ||
XM_011509816.2 | 8 | 3147 | XP_011508118.1 | |
XM_011509817.2 | 7 | 2467 | XP_011508119.1 | |
XM_011509818.2 | 7 | 1859 | XP_011508120.1 | |
XM_017001918.1 | 7 | 1841 | XP_016857407.1 | |
AB040968.2 | 8 | 2278 | BAA96059.2 | |
AK055840.1 | 7 | 2684 | ||
AK299333.1 | 8 | 2469 | ||
BC000066.1 | 7 | 1857 | AAH00066.1 | |
BC028024.1 | 5 | 1494 | AAH28024.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv3032 | Chr.1:155285619 - 155318185 on Build GRCh38 | Insertion | LOC105371451 FDPS PKLR HCN3 |
nsv831636 | Chr.1:155249432 - 155475073 on Build GRCh38 | Loss | POU5F1P4 LOC105371451 ASH1L FAM189B RUSC1-AS1 SCAMP3 FDPS PKLR HCN3 CLK2 MIR555 RUSC1 |
esv33869 | Chr.1:155253492 - 155948170 on Build GRCh38 | Loss | SNORA80E HCN3 CLK2 ASH1L-AS1 ASH1L FAM189B RUSC1-AS1 FDPS PKLR RUSC1 SCARNA26B YY1AP1 RXFP4 LOC105371451 MSTO2P KIAA0907 SCARNA26A GON4L MIR555 POU5F1P4 DAP3 RIT1 SYT11 LOC100505728 SCARNA4 SCAMP3 MSTO1 ARHGEF2 |
nsv952214 | Chr.1:155279610 - 155304509 on Build GRCh38 | Deletion | PKLR HCN3 |
nsv436027 | Chr.1:155260761 - 155291532 on Build GRCh38 | Insertion | SCAMP3 PKLR HCN3 CLK2 |
esv23319 | Chr.1:155257268 - 155292883 on Build GRCh38 | Gain | SCAMP3 PKLR HCN3 CLK2 |
dgv3n68 | Chr.1:155122502 - 155343618 on Build GRCh38 | Loss | TRIM46 LOC105371451 DPM3 SLC50A1 HCN3 CLK2 MIR92B KRTCAP2 ASH1L FAM189B MTX1 RUSC1-AS1 SCAMP3 FDPS PKLR EFNA1 MUC1 GBAP1 RUSC1 THBS3 GBA |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |