Assay Details
Target Gene Details
Entrez Gene ID: | 9271 |
Gene Name: | piwi like RNA-mediated gene silencing 1 |
Gene Aliases: |
CT80.1, HIWI, MIWI, PIWI |
Location: |
Chr.12:130337887-130412708 on Build GRCh38 |
Assay Gene Location: | Within Intron 22 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PIWIL1 | XM_017020229.1 | XP_016875718.1 |
Target Gene Details
Entrez Gene ID: | 23504 |
Gene Name: | RIMS binding protein 2 |
Gene Aliases: |
PPP1R133, RBP2, RIM-BP2 |
Location: |
Chr.12:130396133-130716361 on Build GRCh38 |
Assay Gene Location: | Within Exon 26 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RIMBP2 | NM_015347.4 | 19 | 3355 | NP_056162.4 |
XM_011538102.1 | XP_011536404.1 | |||
XM_011538103.2 | XP_011536405.1 | |||
XM_011538104.2 | XP_011536406.1 | |||
XM_011538105.2 | XP_011536407.1 | |||
XM_011538106.2 | XP_011536408.1 | |||
XM_017019105.1 | XP_016874594.1 | |||
XM_017019106.1 | XP_016874595.1 | |||
XM_017019107.1 | XP_016874596.1 | |||
XM_017019108.1 | XP_016874597.1 | |||
XM_017019109.1 | XP_016874598.1 | |||
XM_017019110.1 | 22 | 3729 | XP_016874599.1 | |
XM_017019111.1 | XP_016874600.1 | |||
AB002316.1 | 19 | 3355 | ||
AY699979.1 | 16 | 3046 | ||
BX641152.1 | 5 | 8604 | CAE46066.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv560744 | Chr.12:130395238 - 130790045 on Build GRCh38 | Gain |
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nsv818938 | Chr.12:130382306 - 130426671 on Build GRCh38 | Gain |
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esv3582027 | Chr.12:130227822 - 130722407 on Build GRCh38 | Gain |
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esv3631200 | Chr.12:130375734 - 130607674 on Build GRCh38 | Gain |
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esv34208 | Chr.12:129528244 - 130603882 on Build GRCh38 | Gain |
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dgv2977n54 | Chr.12:130222462 - 130829669 on Build GRCh38 | Gain |
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nsv560735 | Chr.12:129710094 - 130478603 on Build GRCh38 | Gain |
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esv2759921 | Chr.12:129461919 - 130631031 on Build GRCh38 | Gain+Loss |
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nsv469863 | Chr.12:130350018 - 130554797 on Build GRCh38 | Gain |
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nsv560740 | Chr.12:130341310 - 130399802 on Build GRCh38 | Gain |
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nsv1037230 | Chr.12:130378621 - 130425847 on Build GRCh38 | Gain |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs200426157] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)